RNA–Protein interactions for RNA: ENST00000620632.4

TARDBP-223, Transcript of TAR DNA binding protein, humanhuman

TSL 3

Gene TARDBP, Length 706 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-223ENST00000620632 FANCBQ8NB91 859 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 CTCFLQ8NI51 663 aaPredicted RBP12.56□□□□□ -0.4
TARDBP-223ENST00000620632 PURBQ96QR8 312 aaKnown RBP12.56□□□□□ -0.4
TARDBP-223ENST00000620632 PIGSQ96S52 555 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 ACAD9Q9H845 621 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 ASTN1O14525 1302 aa12.56□□□□□ -0.4
TARDBP-223ENST00000620632 POTEFA5A3E0 1075 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 OPLAHO14841 1288 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 ZBTB43O43298 467 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 HMGCRP04035 888 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 CALM1P0DP23 149 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 CALM2P0DP24 149 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 CALM3P0DP25 149 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 KCTD2Q14681 263 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 MAP3K21Q5TCX8 1036 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 TMTC3Q6ZXV5 915 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 HOMER1Q86YM7 354 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 PIBF1Q8WXW3 757 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 MAML3Q96JK9 1138 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 KIF2CQ99661 725 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 SPZ1Q9BXG8 430 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 UNC93B1Q9H1C4 597 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 CYP46A1Q9Y6A2 500 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 NID2Q14112 1375 aa12.55□□□□□ -0.4
TARDBP-223ENST00000620632 hCG_1642624A0A1W2PR95 340 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 GOLGA8AA7E2F4 631 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 GOLGA8BA8MQT2 603 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 ZBTB5O15062 677 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CAPN15O75808 1086 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 KIF5BP33176 963 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CYP2C19P33261 490 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 SOX10P56693 466 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 EVCP57679 992 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 FGD1P98174 961 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CNTN2Q02246 1040 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CACNB2Q08289 660 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-223ENST00000620632 FUT2Q10981 343 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 RTN1Q16799 776 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 FBXO11Q86XK2 927 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 ANKRD35Q8N283 1001 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CCDC82Q8N4S0 544 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 FAM133AQ8N9E0 248 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 TRPV1Q8NER1 839 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 TBC1D5Q92609 795 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CYP39A1Q9NYL5 469 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 BIN2Q9UBW5 565 aaPredicted RBP12.54□□□□□ -0.4
TARDBP-223ENST00000620632 FBXO40Q9UH90 709 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 DDX49Q9Y6V7 483 aaKnown RBP12.54□□□□□ -0.4
TARDBP-223ENST00000620632 CNTNAP5Q8WYK1 1306 aa12.54□□□□□ -0.4
TARDBP-223ENST00000620632 SOWAHBA6NEL2 793 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 CCL5P13501 91 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 PRKAR2AP13861 404 aaKnown RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 CCND3P30281 292 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 ADD1P35611 737 aaKnown RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 BAATQ14032 418 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 OLFML2BQ68BL8 750 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 NSMFQ6X4W1 530 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 SYNE3Q6ZMZ3 975 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 DDX11Q96FC9 970 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 PDRG1Q9NUG6 133 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 NAP1L2Q9ULW6 460 aaPredicted RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 DIS3Q9Y2L1 958 aaKnown RBP12.53□□□□□ -0.4
TARDBP-223ENST00000620632 ABCB11O95342 1321 aa12.53□□□□□ -0.4
TARDBP-223ENST00000620632 PNMA6FA0A0J9YX94 578 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 CYBAP13498 195 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 SMARCA1P28370 1054 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 PDIA3P30101 505 aaKnown RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 GNAQP50148 359 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 METAP2P50579 478 aaKnown RBP eCLIP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 RCAN1P53805 252 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 RPS6P62753 249 aaKnown RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 UBXN2AP68543 259 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 PRAMEF19Q5SWL8 479 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 TRMT44Q8IYL2 757 aaKnown RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 AMNQ9BXJ7 453 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 NCOA5Q9HCD5 579 aaKnown RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 PAK6Q9NQU5 681 aaPredicted RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 RBM28Q9NW13 759 aaKnown RBP12.52□□□□□ -0.41
TARDBP-223ENST00000620632 COL20A1Q9P218 1284 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 PFASO15067 1338 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 KIAA1217Q5T5P2 1943 aa12.52□□□□□ -0.41
TARDBP-223ENST00000620632 PTPDC1A2A3K4 754 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 POTEB2H3BUK9 544 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 EIF5BO60841 1220 aaKnown RBP12.51□□□□□ -0.41
TARDBP-223ENST00000620632 SNAI1O95863 264 aaPredicted RBP12.51□□□□□ -0.41
TARDBP-223ENST00000620632 RBM25P49756 843 aaKnown RBP12.51□□□□□ -0.41
TARDBP-223ENST00000620632 AK2P54819 239 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 CCT2P78371 535 aaKnown RBP12.51□□□□□ -0.41
TARDBP-223ENST00000620632 NTRK3Q16288 839 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 RNF207Q6ZRF8 634 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 SHISA4Q96DD7 197 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 LZTS2Q9BRK4 669 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 TINF2Q9BSI4 451 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 C22orf23Q9BZE7 217 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.51□□□□□ -0.41
TARDBP-223ENST00000620632 RNF208Q9H0X6 261 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 PNMA2Q9UL42 364 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 TPCN1Q9ULQ1 816 aa12.51□□□□□ -0.41
TARDBP-223ENST00000620632 PCDHA1Q9Y5I3 950 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms