RNA–Protein interactions for RNA: ENST00000620429.4

VPS11-207, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 5 BASIC

Gene VPS11, Length 2,739 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-207ENST00000620429 EP400Q96L91 3159 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 CPLX1O14810 134 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 SMIM24O75264 130 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 CTCFP49711 727 aaPredicted RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 ATP1A2P50993 1020 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 APBA1Q02410 837 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 R3HDM1Q15032 1099 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 EZH2Q15910 746 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 GNPTABQ3T906 1256 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 ZMYM1Q5SVZ6 1142 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 MSL1Q68DK7 614 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 PPP4R3AQ6IN85 833 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 GSPT2Q8IYD1 628 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 ANKRD27Q96NW4 1050 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 RUFY1Q96T51 708 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 MMS19Q96T76 1030 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 MOV10L1Q9BXT6 1211 aaKnown RBP11.51□□□□□ -0.57
VPS11-207ENST00000620429 TRIM4Q9C037 500 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 TMOD3Q9NYL9 352 aa11.51□□□□□ -0.57
VPS11-207ENST00000620429 MROH7-TTC4A0A0A0MT08 1334 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 KLF18A0A0U1RQI7 1052 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 KIF28PB7ZC32 967 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 NPTXRO95502 500 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 APBA3O96018 575 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 CNGA1P29973 690 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 SEC24CP53992 1094 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 NNTQ13423 1086 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 SND1Q7KZF4 910 aaKnown RBP eCLIP11.5□□□□□ -0.57
VPS11-207ENST00000620429 DNAJC10Q8IXB1 793 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 CCDC85AQ96PX6 553 aaPredicted RBP11.5□□□□□ -0.57
VPS11-207ENST00000620429 RANBP17Q9H2T7 1088 aaKnown RBP11.5□□□□□ -0.57
VPS11-207ENST00000620429 SPON1Q9HCB6 807 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 CWC25Q9NXE8 425 aaPredicted RBP11.5□□□□□ -0.57
VPS11-207ENST00000620429 AFDNP55196 1824 aaKnown RBP11.5□□□□□ -0.57
VPS11-207ENST00000620429 UBN2Q6ZU65 1347 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 COL24A1Q17RW2 1714 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 PALLDQ8WX93 1383 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 GPR75-ASB3A0A0A6YYF3 556 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 GOLGA8BA8MQT2 603 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 STXBP3O00186 592 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 HSF2BPO75031 334 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 ALADP13716 330 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 HAND2P61296 217 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 PNOCQ13519 176 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 HSP90AA4PQ58FG1 418 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 OLFM4Q6UX06 510 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 DNAAF2Q9NVR5 837 aaKnown RBP11.5□□□□□ -0.57
VPS11-207ENST00000620429 ASB3Q9Y575 518 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 SHANK3Q9BYB0 1731 aa11.5□□□□□ -0.57
VPS11-207ENST00000620429 MAST3O60307 1309 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 RBM47A0AV96 593 aaKnown RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 C5orf60A6NFR6 353 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 RASSF10A6NK89 507 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 PSMD14O00487 310 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 ZNF18P17022 549 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 TIMM10P62072 90 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 KIF23Q02241 960 aaPredicted RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 LRRC24Q50LG9 513 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 NUGGCQ68CJ6 796 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 EMBQ6PCB8 327 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 ARMC9Q7Z3E5 817 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 ANKIB1Q9P2G1 1089 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 WDR35Q9P2L0 1181 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 NHSQ6T4R5 1651 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 PPIP5K2O43314 1243 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 KCNQ2O43526 872 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 ZMYND10O75800 440 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 KIF4AO95239 1232 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 ABL2P42684 1182 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 CCNG1P51959 295 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 DYNC1I2Q13409 638 aaKnown RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 GLE1Q53GS7 698 aaKnown RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 PPP1R15BQ5SWA1 713 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 PAPD7Q5XG87 772 aaKnown RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 ATG9AQ7Z3C6 839 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 CCT6BQ92526 530 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 CAVIN3Q969G5 261 aa11.49□□□□□ -0.57
VPS11-207ENST00000620429 PUS3Q9BZE2 481 aaKnown RBP11.49□□□□□ -0.57
VPS11-207ENST00000620429 TNS2Q63HR2 1409 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 E7EVH7 732 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 PRC1O43663 620 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 NR1D1P20393 614 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 EPHB4P54760 987 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 NR1I3Q14994 352 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 SLC39A14Q15043 492 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 DPY19L2Q6NUT2 758 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 HIBCHQ6NVY1 386 aaPredicted RBP11.48□□□□□ -0.57
VPS11-207ENST00000620429 SYNE4Q8N205 404 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 CCDC51Q96ER9 411 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 RRP36Q96EU6 259 aaKnown RBP11.48□□□□□ -0.57
VPS11-207ENST00000620429 NDST4Q9H3R1 872 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 LAMB4A4D0S4 1761 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 TOGARAM1Q9Y4F4 1720 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 RNF113AO15541 343 aaKnown RBP11.48□□□□□ -0.57
VPS11-207ENST00000620429 TRIM37O94972 964 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 CDC25CP30307 473 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 MYBPC3Q14896 1274 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 CCDC70Q6NSX1 233 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 CD302Q8IX05 232 aa11.48□□□□□ -0.57
VPS11-207ENST00000620429 SH2D3CQ8N5H7 860 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms