RNA–Protein interactions for RNA: ENST00000620277.4

DKC1-213, Transcript of dyskerin pseudouridine synthase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DKC1, Length 3,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DKC1-213ENST00000620277 DMGDHQ9UI17 866 aaKnown RBP17.93■□□□□ 0.46
DKC1-213ENST00000620277 PACSIN2Q9UNF0 486 aaPredicted RBP17.93■□□□□ 0.46
DKC1-213ENST00000620277 FRMPD2Q68DX3 1309 aaPredicted RBP17.93■□□□□ 0.46
DKC1-213ENST00000620277 LGALS16A8MUM7 142 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 H7C1D1 291 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 AKR1B10O60218 316 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 SF3A3Q12874 501 aaKnown RBP eCLIP17.92■□□□□ 0.465e-6■■■■■ 35.2
DKC1-213ENST00000620277 TDRD12Q587J7 1177 aaKnown RBP17.92■□□□□ 0.46
DKC1-213ENST00000620277 LRRC1Q9BTT6 524 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 RAB21Q9UL25 225 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 COL1A1P02452 1464 aaPredicted RBP17.92■□□□□ 0.46
DKC1-213ENST00000620277 KRT86O43790 486 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 RRAGAQ7L523 313 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 ZNF444Q8N0Y2 327 aaPredicted RBP17.92■□□□□ 0.46
DKC1-213ENST00000620277 CENPHQ9H3R5 247 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 RMND1Q9NWS8 449 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 PCDHA6Q9UN73 950 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 PCDHA8Q9Y5H6 950 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 SPEF2Q9C093 1822 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 ECM29Q5VYK3 1845 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 CALM1P0DP23 149 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 CALM2P0DP24 149 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 CALM3P0DP25 149 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 KIF5AQ12840 1032 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 DDB1Q16531 1140 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 LRRC31Q6UY01 552 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 ELOA2Q8IYF1 753 aaPredicted RBP17.92■□□□□ 0.46
DKC1-213ENST00000620277 SLIT2O94813 1529 aa17.92■□□□□ 0.46
DKC1-213ENST00000620277 TULP2O00295 520 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 BMP15O95972 392 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 USP14P54578 494 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 IFT81Q8WYA0 676 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 CCDC51Q96ER9 411 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 DUSP9Q99956 384 aaKnown RBP17.91■□□□□ 0.46
DKC1-213ENST00000620277 SAMM50Q9Y512 469 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 UTRNP46939 3433 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 MYH6P13533 1939 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 ZSCAN5CA6NGD5 496 aaPredicted RBP17.91■□□□□ 0.46
DKC1-213ENST00000620277 ZNF263O14978 683 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 ATP1A2P50993 1020 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 SPA17Q15506 151 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 TRAPPC11Q7Z392 1133 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 SRLQ86TD4 932 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 TCP11L1Q9NUJ3 509 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 PCDHA4Q9UN74 947 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 COL4A1P02462 1669 aa17.91■□□□□ 0.46
DKC1-213ENST00000620277 RASSF10A6NK89 507 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 SYF2O95926 243 aaKnown RBP17.9■□□□□ 0.46
DKC1-213ENST00000620277 IBSPP21815 317 aaPredicted RBP17.9■□□□□ 0.46
DKC1-213ENST00000620277 KIF5BP33176 963 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 TBC1D9BQ66K14 1250 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 C4orf32Q8N8J7 132 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 AFAP1L1Q8TED9 768 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 COA7Q96BR5 231 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 SELENOOQ9BVL4 669 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 HAUS4Q9H6D7 363 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 LAMB4A4D0S4 1761 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 MYH10P35580 1976 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 POTEMA6NI47 508 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 KLRF2D3W0D1 207 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 CCDC181Q5TID7 509 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 FAM107BQ9H098 131 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 LRRC10BA6NIK2 292 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 F8W031 263 aaPredicted RBP17.9■□□□□ 0.46
DKC1-213ENST00000620277 POTEB2H3BUK9 544 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 KLRC4O43908 158 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 MARCH6O60337 910 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 DDAH1O94760 285 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 RASSF7Q02833 373 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 NELFCDQ8IXH7 590 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 DHX37Q8IY37 1157 aaKnown RBP17.9■□□□□ 0.46
DKC1-213ENST00000620277 IFIH1Q9BYX4 1025 aaKnown RBP17.9■□□□□ 0.46
DKC1-213ENST00000620277 GOLPH3Q9H4A6 298 aa17.9■□□□□ 0.46
DKC1-213ENST00000620277 SMCO2A6NFE2 343 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 CYLC1P35663 651 aaPredicted RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 EIF4A3P38919 411 aaKnown RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 GFPT1Q06210 699 aaPredicted RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 SECISBP2LQ93073 1101 aaKnown RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 BCL9O00512 1426 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 LONP1P36776 959 aaKnown RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 CCT5P48643 541 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 RPS8P62241 208 aaKnown RBP17.89■□□□□ 0.45
DKC1-213ENST00000620277 TTI2Q6NXR4 508 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 POTEDQ86YR6 584 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 SH2D3CQ8N5H7 860 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 BRIP1Q9BX63 1249 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 GBP3Q9H0R5 595 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 ANAPC4Q9UJX5 808 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 HPCAL4Q9UM19 191 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 MYH13Q9UKX3 1938 aa17.89■□□□□ 0.45
DKC1-213ENST00000620277 ZEB2O60315 1214 aa17.88■□□□□ 0.45
DKC1-213ENST00000620277 NBPF5PQ86XG9 351 aaPredicted RBP17.88■□□□□ 0.45
DKC1-213ENST00000620277 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.88■□□□□ 0.45
DKC1-213ENST00000620277 CAPN11Q9UMQ6 739 aa17.88■□□□□ 0.45
DKC1-213ENST00000620277 GUCY2FP51841 1108 aa17.88■□□□□ 0.45
DKC1-213ENST00000620277 HNRNPLLQ8WVV9 542 aaKnown RBP17.88■□□□□ 0.45
DKC1-213ENST00000620277 P2RX5Q93086 422 aa17.88■□□□□ 0.45
DKC1-213ENST00000620277 ITIH6Q6UXX5 1313 aa17.88■□□□□ 0.45
DKC1-213ENST00000620277 DNM2P50570 870 aa17.87■□□□□ 0.45
DKC1-213ENST00000620277 KRT83P78385 493 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms