RNA–Protein interactions for RNA: ENST00000618262.4

SRRT-216, Transcript of serrate, RNA effector molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SRRT, Length 2,955 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-216ENST00000618262 COPB2P35606 906 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 GABPAQ06546 454 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ME3Q16798 604 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ABCB5Q2M3G0 1257 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ACER1Q8TDN7 264 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ZSCAN10Q96SZ4 725 aaPredicted RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 DUSP9Q99956 384 aaKnown RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRRT-216ENST00000618262 KRT23Q9C075 422 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 DHX36Q9H2U1 1008 aaKnown RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 RETREG1Q9H6L5 497 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 ITM2BQ9Y287 266 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 MAST2Q6P0Q8 1798 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 FRMPD2Q68DX3 1309 aaPredicted RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 ERICH2A1L162 156 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 TIMM44O43615 452 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 WTAPQ15007 396 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 IFIT1BQ5T764 474 aaKnown RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 IQCA1Q86XH1 822 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 APOBEC3FQ8IUX4 373 aaKnown RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 PMM1Q92871 262 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 SPTLC3Q9NUV7 552 aa13.62□□□□□ -0.23
SRRT-216ENST00000618262 RABL2AQ9UBK7 228 aaPredicted RBP13.62□□□□□ -0.23
SRRT-216ENST00000618262 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.62□□□□□ -0.23
SRRT-216ENST00000618262 GOLGA8BA8MQT2 603 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 TRPC1P48995 793 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 NYAP1Q6ZVC0 841 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 PNMA8AQ86V59 439 aaPredicted RBP13.61□□□□□ -0.23
SRRT-216ENST00000618262 NEK11Q8NG66 645 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 GPT2Q8TD30 523 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 PPM1EQ8WY54 764 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 BICD1Q96G01 975 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 MYH1P12882 1939 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 CELF2O95319 508 aaKnown RBP13.61□□□□□ -0.23
SRRT-216ENST00000618262 IMPDH2P12268 514 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 ADD1P35611 737 aaKnown RBP13.61□□□□□ -0.23
SRRT-216ENST00000618262 SNAP25P60880 206 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 EXOSC10Q01780 885 aaKnown RBP13.61□□□□□ -0.23
SRRT-216ENST00000618262 TMX3Q96JJ7 454 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 TTC14Q96N46 770 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 VAT1LQ9HCJ6 419 aa13.61□□□□□ -0.23
SRRT-216ENST00000618262 BAZ2BQ9UIF8 2168 aaKnown RBP13.6□□□□□ -0.23
SRRT-216ENST00000618262 FAM83AQ86UY5 434 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 IGDCC4Q8TDY8 1250 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 ELP3Q9H9T3 547 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 PSME4Q14997 1843 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 CCDC69A6NI79 296 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 EEF2P13639 858 aaKnown RBP13.6□□□□□ -0.23
SRRT-216ENST00000618262 USP17L2Q6R6M4 530 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 KCNB2Q92953 911 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 AGBL1Q96MI9 1066 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 CNNM2Q9H8M5 875 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 LY9Q9HBG7 655 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 PGAP2Q9UHJ9 254 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 CDK5RAP2Q96SN8 1893 aa13.6□□□□□ -0.23
SRRT-216ENST00000618262 UNCXA6NJT0 531 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 AP1G2O75843 785 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 TRIML1Q8N9V2 468 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 PHKBQ93100 1093 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 RBSNQ9H1K0 784 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 A0A1W2PRG0 241 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 TAL1P17542 331 aaPredicted RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 KCTD1Q719H9 257 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 FOXP4Q8IVH2 680 aaPredicted RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 ZNF784Q8NCA9 323 aaPredicted RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 RNF214Q8ND24 703 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 NEK9Q8TD19 979 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 GJB4Q9NTQ9 266 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 SLC12A7Q9Y666 1083 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 ZHX2Q9Y6X8 837 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 NAV1Q8NEY1 1877 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 SH2B2O14492 632 aaPredicted RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 JAK2O60674 1132 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 SLC16A2P36021 539 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 ICA1Q05084 483 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 PRPF4BQ13523 1007 aaKnown RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 RBBP5Q15291 538 aaKnown RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 DRAXINQ8NBI3 349 aaPredicted RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 OTUD5Q96G74 571 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 TMEM47Q9BQJ4 181 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 LRRC27Q9C0I9 530 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 GPCPD1Q9NPB8 672 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 ST7Q9NRC1 585 aa13.59□□□□□ -0.23
SRRT-216ENST00000618262 DIS3Q9Y2L1 958 aaKnown RBP13.59□□□□□ -0.23
SRRT-216ENST00000618262 PEX10O60683 326 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 GUCY1A2P33402 732 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 TBC1D8BQ0IIM8 1120 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 GPS2Q13227 327 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 KLHL40Q2TBA0 621 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 RCSD1Q6JBY9 416 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 TRIM42Q8IWZ5 723 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 ZNF397Q8NF99 534 aaPredicted RBP13.58□□□□□ -0.24
SRRT-216ENST00000618262 GIMAP7Q8NHV1 300 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 ZNF341Q9BYN7 854 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 CABP5Q9NP86 173 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 USP2O75604 605 aaPredicted RBP13.58□□□□□ -0.24
SRRT-216ENST00000618262 KCNA2P16389 499 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 SPP2Q13103 211 aa13.58□□□□□ -0.24
SRRT-216ENST00000618262 IKQ13123 557 aaPredicted RBP13.58□□□□□ -0.24
SRRT-216ENST00000618262 CCDC186Q7Z3E2 898 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms