RNA–Protein interactions for RNA: ENST00000618078.1

CBX5-206, Transcript of chromobox 5, humanhuman

TSL 2

Gene CBX5, Length 2,627 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-206ENST00000618078 GSDMAQ96QA5 445 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 RIC8AQ9NPQ8 531 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 F5H6K3 240 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 GTPBP6O43824 516 aaPredicted RBP17.16■□□□□ 0.34
CBX5-206ENST00000618078 NDUFB10O96000 172 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 ZNF18P17022 549 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 CCZ1BP86790 482 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 CCZ1P86791 482 aaPredicted RBP17.16■□□□□ 0.34
CBX5-206ENST00000618078 KLRC3Q07444 240 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 DNTTIP2Q5QJE6 756 aaKnown RBP17.16■□□□□ 0.34
CBX5-206ENST00000618078 DCAF4Q8WV16 495 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 VEZTQ9HBM0 779 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 CNTNAP1P78357 1384 aa17.16■□□□□ 0.34
CBX5-206ENST00000618078 A0A1W2PRG0 241 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 SHTN1A0MZ66 631 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 PPP1R3GB7ZBB8 358 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 TECP42680 631 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 PPP4R3BQ5MIZ7 849 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 TMOD2Q9NZR1 351 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.15■□□□□ 0.34
CBX5-206ENST00000618078 COL2A1P02458 1487 aaPredicted RBP17.15■□□□□ 0.34
CBX5-206ENST00000618078 CDC37Q16543 378 aaPredicted RBP17.15■□□□□ 0.34
CBX5-206ENST00000618078 RBM26Q5T8P6 1007 aaKnown RBP17.15■□□□□ 0.34
CBX5-206ENST00000618078 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 PPP1R18Q6NYC8 613 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 ARMCX5Q6P1M9 558 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 CCSER1Q9C0I3 900 aa17.15■□□□□ 0.34
CBX5-206ENST00000618078 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.15■□□□□ 0.34
CBX5-206ENST00000618078 SCAF8Q9UPN6 1271 aaKnown RBP17.15■□□□□ 0.34
CBX5-206ENST00000618078 SMCHD1A6NHR9 2005 aa17.14■□□□□ 0.34
CBX5-206ENST00000618078 CLK2P49760 499 aaKnown RBP17.14■□□□□ 0.33
CBX5-206ENST00000618078 CABP7Q86V35 215 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 NIM1KQ8IY84 436 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 OGFOD1Q8N543 542 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 PYM1Q9BRP8 204 aaKnown RBP17.14■□□□□ 0.33
CBX5-206ENST00000618078 HDAC9Q9UKV0 1011 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 ZNRF3Q9ULT6 936 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 SYNRGQ9UMZ2 1314 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 PLCG1P19174 1290 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 TXKP42681 527 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 SPDYE2Q495Y8 402 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 SPICE1Q8N0Z3 855 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 CUL5Q93034 780 aa17.14■□□□□ 0.33
CBX5-206ENST00000618078 USP17L15C9J2P7 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L13C9JLJ4 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L11C9JVI0 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L18D6R9N7 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L22D6RA61 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L17D6RBQ6 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L19D6RCP7 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L20D6RJB6 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 ERCC5P28715 1186 aaPredicted RBP17.13■□□□□ 0.33
CBX5-206ENST00000618078 ECE1P42892 770 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 CXCL9Q07325 125 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L24Q0WX57 530 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 USP17L6PQ6QN14 398 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 MMTAG2Q9BU76 263 aaKnown RBP17.13■□□□□ 0.33
CBX5-206ENST00000618078 TMEM39BQ9GZU3 492 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 PIM2Q9P1W9 311 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 CTNND2Q9UQB3 1225 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 RPN1P04843 607 aaKnown RBP17.13■□□□□ 0.33
CBX5-206ENST00000618078 SKILP12757 684 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 GJA10Q969M2 543 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 MTMR9Q96QG7 549 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 PSTPIP2Q9H939 334 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 IMPACTQ9P2X3 320 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 PPP1R1BQ9UD71 204 aaPredicted RBP17.13■□□□□ 0.33
CBX5-206ENST00000618078 GDAQ9Y2T3 454 aa17.13■□□□□ 0.33
CBX5-206ENST00000618078 GOLGA8FQ08AF8 430 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 GOLGA8DPQ0D2H9 430 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 CALCRLQ16602 461 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 KIAA1755Q5JYT7 1200 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 ACER1Q8TDN7 264 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 FAM151AQ8WW52 585 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 UIMC1Q96RL1 719 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 PCDHA1Q9Y5I3 950 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 BRCA1P38398 1863 aaKnown RBP17.12■□□□□ 0.33
CBX5-206ENST00000618078 CDK11BP21127 795 aaKnown RBP17.12■□□□□ 0.33
CBX5-206ENST00000618078 GMCL1P1Q8NEA9 526 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 MAPK8IP1Q9UQF2 711 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 FER1L6Q2WGJ9 1857 aa17.12■□□□□ 0.33
CBX5-206ENST00000618078 USP27XA6NNY8 438 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 CBFA2T2O43439 604 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 GSDMDP57764 484 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 IKQ13123 557 aaPredicted RBP17.11■□□□□ 0.33
CBX5-206ENST00000618078 NBPF9Q3BBW0 867 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 MIGA2Q7L4E1 593 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 VSTM4Q8IW00 320 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 IGSF22Q8N9C0 903 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 FBXO41Q8TF61 875 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 AK8Q96MA6 479 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 HERC5Q9UII4 1024 aaKnown RBP17.11■□□□□ 0.33
CBX5-206ENST00000618078 POTEMA6NI47 508 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 MRPL12P52815 198 aaKnown RBP17.11■□□□□ 0.33
CBX5-206ENST00000618078 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 P2RX7Q99572 595 aaKnown RBP17.11■□□□□ 0.33
CBX5-206ENST00000618078 KBTBD4Q9NVX7 518 aa17.11■□□□□ 0.33
CBX5-206ENST00000618078 MYO1BO43795 1136 aa17.1■□□□□ 0.33
CBX5-206ENST00000618078 USH1GQ495M9 461 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms