RNA–Protein interactions for RNA: ENST00000617948.4

DEF8-229, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

APPRIS P4 TSL 5 BASIC

Gene DEF8, Length 3,883 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-229ENST00000617948 MARF1Q9Y4F3 1742 aaKnown RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 ELP1O95163 1332 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 PNMA6FA0A0J9YX94 578 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 CABP7Q86V35 215 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 SMYD4Q8IYR2 804 aaPredicted RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 GLIS2Q9BZE0 524 aaPredicted RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 ZBTB5O15062 677 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 TBCAO75347 108 aaKnown RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 SHMT1P34896 483 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 ZNF75DP51815 510 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 AMPD3Q01432 767 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 GRM4Q14833 912 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 TMC6Q7Z403 805 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 KIAA1524Q8TCG1 905 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 TRPM4Q8TD43 1214 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 PSMD1Q99460 953 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 FOXP1Q9H334 677 aaPredicted RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 NFKBIEO00221 500 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 ZNF543Q08ER8 600 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 RCSD1Q6JBY9 416 aa12.55□□□□□ -0.4
DEF8-229ENST00000617948 MRPL11Q9Y3B7 192 aaKnown RBP12.55□□□□□ -0.4
DEF8-229ENST00000617948 SMTNL1A8MU46 457 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 GAS7O60861 476 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 IPO7O95373 1038 aaKnown RBP12.54□□□□□ -0.4
DEF8-229ENST00000617948 MTIF2P46199 727 aaKnown RBP12.54□□□□□ -0.4
DEF8-229ENST00000617948 ARMC9Q7Z3E5 817 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 PLA2G4DQ86XP0 818 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 KIF18AQ8NI77 898 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 SH2D3AQ9BRG2 576 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 CLSTN2Q9H4D0 955 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 PDE4DIPQ5VU43 2346 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 SFPQP23246 707 aaKnown RBP eCLIP12.54□□□□□ -0.4
DEF8-229ENST00000617948 SEC23AQ15436 765 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 RPAP3Q9H6T3 665 aaPredicted RBP12.54□□□□□ -0.4
DEF8-229ENST00000617948 OR52Z1P0C646 297 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 USP49Q70CQ1 688 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 APOBEC3FQ8IUX4 373 aaKnown RBP12.54□□□□□ -0.4
DEF8-229ENST00000617948 NELFCDQ8IXH7 590 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 ANAPC4Q9UJX5 808 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 TACC3Q9Y6A5 838 aa12.54□□□□□ -0.4
DEF8-229ENST00000617948 POTEMA6NI47 508 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 VGLL3A8MV65 326 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 TDP2O95551 362 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 PDE4DQ08499 809 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 SNRNP48Q6IEG0 339 aaKnown RBP12.53□□□□□ -0.4
DEF8-229ENST00000617948 PPFIBP1Q86W92 1011 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 KCNB2Q92953 911 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 RCOR1Q9UKL0 485 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 VIL1P09327 827 aaKnown RBP12.53□□□□□ -0.4
DEF8-229ENST00000617948 ATL3Q6DD88 541 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 KANK3Q6NY19 840 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 SLC30A10Q6XR72 485 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 SEPT14Q6ZU15 432 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 HARSP12081 509 aaKnown RBP12.53□□□□□ -0.4
DEF8-229ENST00000617948 HERC4Q5GLZ8 1057 aaPredicted RBP12.53□□□□□ -0.4
DEF8-229ENST00000617948 TMEM87AQ8NBN3 555 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 PCDHA5Q9Y5H7 936 aa12.53□□□□□ -0.4
DEF8-229ENST00000617948 N4BP3O15049 544 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 GRIN3BO60391 1043 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 EPHX2P34913 555 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 HDLBPQ00341 1268 aaKnown RBP12.52□□□□□ -0.4
DEF8-229ENST00000617948 CCDC40Q4G0X9 1142 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 SV2BQ7L1I2 683 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 SMAP1Q8IYB5 467 aaPredicted RBP12.52□□□□□ -0.4
DEF8-229ENST00000617948 AGBL1Q96MI9 1066 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 TCHPQ9BT92 498 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 SALL1Q9NSC2 1324 aa12.52□□□□□ -0.4
DEF8-229ENST00000617948 PABPC4Q13310 644 aaKnown RBP eCLIP12.52□□□□□ -0.413e-9■■■■□ 21.8
DEF8-229ENST00000617948 POSTNQ15063 836 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 LONRF3Q496Y0 759 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.52□□□□□ -0.412e-6■■■■■ 149.1
DEF8-229ENST00000617948 PRR12Q9ULL5 1215 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.52□□□□□ -0.41
DEF8-229ENST00000617948 GRIN1Q05586 938 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 FAM163AQ96GL9 167 aaPredicted RBP12.52□□□□□ -0.41
DEF8-229ENST00000617948 RRAGCQ9HB90 399 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 KIAA1024Q9UPX6 916 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 ZNF541Q9H0D2 1346 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 LRRC37A3O60309 1634 aa12.52□□□□□ -0.41
DEF8-229ENST00000617948 ITGB4P16144 1822 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 CAP2P40123 477 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 BICD1Q96G01 975 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 ANO3Q9BYT9 981 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 JMJD4Q9H9V9 463 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 POLR3EQ9NVU0 708 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 BARHL2Q9NY43 387 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 MAD2L2Q9UI95 211 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 PAXBP1Q9Y5B6 917 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 UTRNP46939 3433 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 IQCA1LA6NCM1 817 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 NOP56O00567 594 aaKnown RBP12.51□□□□□ -0.41
DEF8-229ENST00000617948 CMA1P23946 247 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 UBASH3AP57075 661 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 PLCD3Q8N3E9 789 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 PRPF38AQ8NAV1 312 aaKnown RBP12.51□□□□□ -0.41
DEF8-229ENST00000617948 FAM217BQ9NTX9 383 aaPredicted RBP12.51□□□□□ -0.41
DEF8-229ENST00000617948 SEPT11Q9NVA2 429 aaKnown RBP12.51□□□□□ -0.41
DEF8-229ENST00000617948 USP14P54578 494 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 LDHDQ86WU2 507 aa12.51□□□□□ -0.41
DEF8-229ENST00000617948 FERMT2Q96AC1 680 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms