RNA–Protein interactions for RNA: ENST00000617930.1

CNOT3-209, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

TSL 2

Gene CNOT3, Length 2,047 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-209ENST00000617930 CACTINQ8WUQ7 758 aaKnown RBP19.86■□□□□ 0.77
CNOT3-209ENST00000617930 TEPSINQ96N21 525 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 DPYDQ12882 1025 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 JAKMIP3Q5VZ66 844 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 SMARCE1Q969G3 411 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 MTMR8Q96EF0 704 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 XPO4Q9C0E2 1151 aaKnown RBP19.86■□□□□ 0.77
CNOT3-209ENST00000617930 C6orf50Q9HD87 102 aa19.86■□□□□ 0.77
CNOT3-209ENST00000617930 ESYT2A0FGR8 921 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 GTF2F1P35269 517 aaKnown RBP eCLIP19.85■□□□□ 0.77
CNOT3-209ENST00000617930 MIGA2Q7L4E1 593 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 FAM83AQ86UY5 434 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 IFNKQ9P0W0 207 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 EPS15P42566 896 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 HIRAP54198 1017 aaPredicted RBP19.85■□□□□ 0.77
CNOT3-209ENST00000617930 RASA3Q14644 834 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 KANK3Q6NY19 840 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 FANCLQ9NW38 375 aa19.85■□□□□ 0.77
CNOT3-209ENST00000617930 CD44P16070 742 aaKnown RBP19.84■□□□□ 0.77
CNOT3-209ENST00000617930 GNA11P29992 359 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 LONP1P36776 959 aaKnown RBP19.84■□□□□ 0.77
CNOT3-209ENST00000617930 MYL5Q02045 173 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 KIF4BQ2VIQ3 1234 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 LETM2Q2VYF4 491 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 NAALADL2Q58DX5 795 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 TBCKQ8TEA7 893 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.84■□□□□ 0.77
CNOT3-209ENST00000617930 NYAP2Q9P242 653 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 HACL1Q9UJ83 578 aa19.84■□□□□ 0.77
CNOT3-209ENST00000617930 HOOK1Q9UJC3 728 aaKnown RBP19.84■□□□□ 0.77
CNOT3-209ENST00000617930 PNMA6FA0A0J9YX94 578 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 SMTNL1A8MU46 457 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 DDNO94850 711 aaPredicted RBP19.83■□□□□ 0.77
CNOT3-209ENST00000617930 GH2P01242 217 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 KARSQ15046 597 aaKnown RBP19.83■□□□□ 0.77
CNOT3-209ENST00000617930 NONOQ15233 471 aaKnown RBP eCLIP19.83■□□□□ 0.77
CNOT3-209ENST00000617930 KRT25Q7Z3Z0 450 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 CCDC12Q8WUD4 166 aaPredicted RBP19.83■□□□□ 0.77
CNOT3-209ENST00000617930 BLZF1Q9H2G9 400 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 KANSL2Q9H9L4 492 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 GPRC5DQ9NZD1 345 aa19.83■□□□□ 0.77
CNOT3-209ENST00000617930 CCNT1O60563 726 aaKnown RBP19.83■□□□□ 0.76
CNOT3-209ENST00000617930 CCDC96Q2M329 555 aa19.83■□□□□ 0.76
CNOT3-209ENST00000617930 TRMT44Q8IYL2 757 aaKnown RBP19.83■□□□□ 0.76
CNOT3-209ENST00000617930 RNF181Q9P0P0 153 aa19.83■□□□□ 0.76
CNOT3-209ENST00000617930 A0A1W2PRG0 241 aa19.82■□□□□ 0.76
CNOT3-209ENST00000617930 FANCCQ00597 558 aa19.82■□□□□ 0.76
CNOT3-209ENST00000617930 ABCB5Q2M3G0 1257 aa19.82■□□□□ 0.76
CNOT3-209ENST00000617930 GPATCH4Q5T3I0 446 aaKnown RBP19.82■□□□□ 0.76
CNOT3-209ENST00000617930 DTHD1Q6ZMT9 781 aa19.82■□□□□ 0.76
CNOT3-209ENST00000617930 SMYD4Q8IYR2 804 aaPredicted RBP19.82■□□□□ 0.76
CNOT3-209ENST00000617930 REXO1Q8N1G1 1221 aaKnown RBP19.82■□□□□ 0.76
CNOT3-209ENST00000617930 MYO1BO43795 1136 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 CUL4BQ13620 913 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 UBE2SQ16763 222 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 NEK8Q86SG6 692 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 GPC2Q8N158 579 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 TRIML1Q8N9V2 468 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 IQUBQ8NA54 791 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 MLKLQ8NB16 471 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 NUP88Q99567 741 aaPredicted RBP19.81■□□□□ 0.76
CNOT3-209ENST00000617930 HERC5Q9UII4 1024 aaKnown RBP19.81■□□□□ 0.76
CNOT3-209ENST00000617930 ZBTB5O15062 677 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 CLK2P49760 499 aaKnown RBP19.81■□□□□ 0.76
CNOT3-209ENST00000617930 MAP3K10Q02779 954 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 ICA1Q05084 483 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 HSP90AA4PQ58FG1 418 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 SLFN13Q68D06 897 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 FILIP1Q7Z7B0 1213 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 CCDC84Q86UT8 332 aaPredicted RBP19.81■□□□□ 0.76
CNOT3-209ENST00000617930 LRRC8AQ8IWT6 810 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 ARID3AQ99856 593 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 TRIM34Q9BYJ4 488 aa19.81■□□□□ 0.76
CNOT3-209ENST00000617930 hCG_1984214I3L0E3 225 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 PTPN21Q16825 1174 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 PRAMEF18Q5VWM3 479 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 C9orf131Q5VYM1 1079 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 TMEM179Q6ZVK1 233 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 ZNF713Q8N859 430 aaPredicted RBP19.8■□□□□ 0.76
CNOT3-209ENST00000617930 INTS13Q9NVM9 706 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 F5H6K3 240 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 RAD21O60216 631 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 SMC2O95347 1197 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 PRPHP41219 470 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 ADCY7P51828 1080 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 KLRC3Q07444 240 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 KIAA1755Q5JYT7 1200 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 POTEDQ86YR6 584 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 TSC1Q92574 1164 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 PLIN2Q99541 437 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 RIC8AQ9NPQ8 531 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 DISC1Q9NRI5 854 aa19.8■□□□□ 0.76
CNOT3-209ENST00000617930 POLR2AP24928 1970 aaKnown RBP19.8■□□□□ 0.76
CNOT3-209ENST00000617930 PPP1R3GB7ZBB8 358 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 SLC37A4O43826 429 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 ZNF18P17022 549 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 ECE1P42892 770 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 SLC1A4P43007 532 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 SNAP25P60880 206 aa19.79■□□□□ 0.76
CNOT3-209ENST00000617930 QRICH1Q2TAL8 776 aa19.79■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms