RNA–Protein interactions for RNA: ENST00000616701.4

SEMA3B-212, Transcript of semaphorin 3B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SEMA3B, Length 2,958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-212ENST00000616701 ZBTB7AO95365 584 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 LONP1P36776 959 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 RRP1BQ14684 758 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 NEK8Q86SG6 692 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 POTEDQ86YR6 584 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 CCDC34Q96HJ3 373 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 EHD4Q9H223 541 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 DHX36Q9H2U1 1008 aaKnown RBP17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 PPP1R1BQ9UD71 204 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 MYH4Q9Y623 1939 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 SKILP12757 684 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 TECP42680 631 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 TNNI2P48788 182 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 ADCY7P51828 1080 aa17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 FAM43BQ6ZT52 329 aaPredicted RBP17.59■□□□□ 0.41
SEMA3B-212ENST00000616701 SIPA1L1O43166 1804 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 TXLNAP40222 546 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 UBA7P41226 1012 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 FKBP1AP62942 108 aaKnown RBP17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 HDLBPQ00341 1268 aaKnown RBP17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 CCDC93Q567U6 631 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 PDCL2Q8N4E4 241 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 SUPT20HQ8NEM7 779 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 LRRC15Q8TF66 581 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 CSRNP1Q96S65 589 aa17.58■□□□□ 0.41
SEMA3B-212ENST00000616701 NEMFO60524 1076 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 KCNA3P22001 575 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 SLC1A4P43007 532 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 ICA1Q05084 483 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 SLFN13Q68D06 897 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 SIAH1Q8IUQ4 282 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 GJA10Q969M2 543 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 CCDC17Q96LX7 622 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 C16orf45Q96MC5 204 aaPredicted RBP17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 USP27XA6NNY8 438 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 TDP2O95551 362 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 GH2P01242 217 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 SMARCA1P28370 1054 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 DHX8Q14562 1220 aaKnown RBP17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 ARMCX5Q6P1M9 558 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 CDAN1Q8IWY9 1227 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 MRIQ9BWK5 157 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 DISC1Q9NRI5 854 aa17.58■□□□□ 0.4
SEMA3B-212ENST00000616701 PNMA6FA0A0J9YX94 578 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 OR52Z1P0C646 297 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 TXKP42681 527 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 CCZ1BP86790 482 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 CCZ1P86791 482 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 ABCB5Q2M3G0 1257 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 RRAGBQ5VZM2 374 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 TRIML1Q8N9V2 468 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 PRIMPOLQ96LW4 560 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 VEZTQ9HBM0 779 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 INTS13Q9NVM9 706 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 TRMT1Q9NXH9 659 aaKnown RBP17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 ATF5Q9Y2D1 282 aaPredicted RBP17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 MYO3BQ8WXR4 1341 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 NAALADL2Q58DX5 795 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 SPICE1Q8N0Z3 855 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 DACH1Q9UI36 760 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 CTNND2Q9UQB3 1225 aa17.57■□□□□ 0.4
SEMA3B-212ENST00000616701 SLC37A4O43826 429 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 IKQ13123 557 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 RSBN1LQ6PCB5 846 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 COL4A5P29400 1685 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 RGPD3A6NKT7 1758 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 RGPD4Q7Z3J3 1758 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 CC2D2BQ6DHV5 1058 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 CREBRFQ8IUR6 639 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 ENOX1Q8TC92 643 aaKnown RBP17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 KANSL2Q9H9L4 492 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 GDAQ9Y2T3 454 aa17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 ZNF646O15015 1829 aaPredicted RBP17.56■□□□□ 0.4
SEMA3B-212ENST00000616701 EDIL3O43854 480 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 SLC20A2Q08357 652 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 C10orf71Q711Q0 1435 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 PPP1R3GB7ZBB8 358 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L15C9J2P7 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L13C9JLJ4 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L11C9JVI0 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L18D6R9N7 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L22D6RA61 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L17D6RBQ6 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L19D6RCP7 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L20D6RJB6 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 ZBTB5O15062 677 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L24Q0WX57 530 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 QRICH1Q2TAL8 776 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 GPATCH4Q5T3I0 446 aaKnown RBP17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 TATDN1Q6P1N9 297 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 USP17L6PQ6QN14 398 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 GSDMAQ96QA5 445 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 SYNRGQ9UMZ2 1314 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 GTPBP6O43824 516 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 PLCG1P19174 1290 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 GTF2F1P35269 517 aaKnown RBP eCLIP17.55■□□□□ 0.41e-7■□□□□ 9.8
SEMA3B-212ENST00000616701 TPD52L1Q16890 204 aaPredicted RBP17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 CABP7Q86V35 215 aa17.55■□□□□ 0.4
SEMA3B-212ENST00000616701 SHTN1A0MZ66 631 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms