RNA–Protein interactions for RNA: ENST00000614494.1

TARDBP-216, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-216ENST00000614494 HDAC1Q13547 482 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 RAB30Q15771 203 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 CCDC144BQ3MJ40 725 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 ANO1Q5XXA6 986 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 IQSEC1Q6DN90 963 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 CCDC144CPQ8IYA2 1237 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 LRRC47Q8N1G4 583 aaKnown RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 FAM133AQ8N9E0 248 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 TRIM43Q96BQ3 446 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 NUP88Q99567 741 aaPredicted RBP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 TCP11L1Q9NUJ3 509 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 POLR3EQ9NVU0 708 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 TBX21Q9UL17 535 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.54□□□□□ -1.04
TARDBP-216ENST00000614494 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
TARDBP-216ENST00000614494 PRDM1O75626 825 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 FGRP09769 529 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 TOP1P11387 765 aaKnown RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 CDK7P50613 346 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 TRAF1Q13077 416 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 SLFNL1Q499Z3 407 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 GPATCH4Q5T3I0 446 aaKnown RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 C20orf194Q5TEA3 1177 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 BTNL9Q6UXG8 535 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 NOL8Q76FK4 1167 aaKnown RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 TLK2Q86UE8 772 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 RPUSD2Q8IZ73 545 aaKnown RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 MAFAQ8NHW3 353 aaPredicted RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 MORC4Q8TE76 937 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 VTI1AQ96AJ9 217 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 GUCD1Q96NT3 240 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 TRERF1Q96PN7 1200 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 CDX2Q99626 313 aaPredicted RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 SEMA6BQ9H3T3 888 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 A1CFQ9NQ94 594 aaKnown RBP8.53□□□□□ -1.04
TARDBP-216ENST00000614494 METRNQ9UJH8 293 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 CCPG1Q9ULG6 757 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 RIPK3Q9Y572 518 aa8.53□□□□□ -1.04
TARDBP-216ENST00000614494 MYH4Q9Y623 1939 aa8.52□□□□□ -1.04
TARDBP-216ENST00000614494 RANBP6O60518 1105 aaKnown RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 ALAS1P13196 640 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 TAL1P17542 331 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 MCCP23508 829 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 DNAJB2P25686 324 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 RFC2P35250 354 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 SLC4A3P48751 1232 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 FSCN1Q16658 493 aaKnown RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 CCDC96Q2M329 555 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 MCMDC2Q4G0Z9 681 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 C9orf50Q5SZB4 431 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 ASTLQ6HA08 431 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 SLC43A3Q8NBI5 491 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 RGS22Q8NE09 1264 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 DNERQ8NFT8 737 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 ESR2Q92731 530 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 GAS2L1Q99501 681 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 RANBP17Q9H2T7 1088 aaKnown RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 GPHNQ9NQX3 736 aaPredicted RBP8.52□□□□□ -1.05
TARDBP-216ENST00000614494 HOMER2Q9NSB8 354 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 CYP39A1Q9NYL5 469 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 MSRAQ9UJ68 235 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 PRR12Q9ULL5 1215 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 SALL3Q9BXA9 1300 aa8.52□□□□□ -1.05
TARDBP-216ENST00000614494 ZNFX1Q9P2E3 1918 aaKnown RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 PARNO95453 639 aaKnown RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 RRP1P56182 461 aaKnown RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 PTPN11Q06124 597 aaPredicted RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 DUSP28Q4G0W2 176 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 AKNAD1Q5T1N1 836 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 SYDE2Q5VT97 1194 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 SH3RF1Q7Z6J0 888 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 IQCA1Q86XH1 822 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 DGKHQ86XP1 1220 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 CCDC155Q8N6L0 562 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 TIFAQ96CG3 184 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 KATNBL1Q9H079 304 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 TSPYL2Q9H2G4 693 aaPredicted RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 HIPK3Q9H422 1215 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 IL23AQ9NPF7 189 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 TOMM22Q9NS69 142 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 GNEQ9Y223 722 aaKnown RBP8.51□□□□□ -1.05
TARDBP-216ENST00000614494 ZNF536O15090 1300 aa8.51□□□□□ -1.05
TARDBP-216ENST00000614494 SPDYE4A6NLX3 237 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 SMIM22K7EJ46 135 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 CD4P01730 458 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 CHGBP05060 677 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 ACTN1P12814 892 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 PDE1AP54750 535 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 ITGA7Q13683 1181 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 PPP2R5BQ15173 497 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 ANKRD45Q5TZF3 282 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 RASIP1Q5U651 963 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 TSHZ3Q63HK5 1081 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 NSMFQ6X4W1 530 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 MFSD6Q6ZSS7 791 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 MCF2L2Q86YR7 1114 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 STK11IPQ8N1F8 1099 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 SAMD3Q8N6K7 520 aa8.5□□□□□ -1.05
TARDBP-216ENST00000614494 SCFD2Q8WU76 684 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms