RNA–Protein interactions for RNA: ENST00000614197.4

NPIPB4-222, Transcript of nuclear pore complex interacting protein family member B4, human

TSL 5 BASIC

Gene NPIPB4, Length 1,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPB4-222	ENST00000614197	CNTN2	Q02246	1040 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TNFAIP2	Q03169	654 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SART3	Q15020	963 aa	Known RBP	12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CCDC144B	Q3MJ40	725 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TRIM60	Q495X7	471 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ASPRV1	Q53RT3	343 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	C1orf53	Q5VUE5	145 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	KIAA1211	Q6ZU35	1233 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	RALYL	Q86SE5	291 aa	Known RBP	12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CYP39A1	Q9NYL5	469 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MYH4	Q9Y623	1939 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SYNRG	Q9UMZ2	1314 aa		12.83	□□□□□ -0.36
NPIPB4-222	ENST00000614197	LOC102724159	A0A0B4J2E5	919 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197		A0A1W2PQ45	241 aa	Predicted RBP	12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197		A0A1W2PQY0	241 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PARP1	P09874	1014 aa	Known RBP	12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PDE4A	P27815	886 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ACLY	P53396	1101 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PWP2	Q15269	919 aa	Known RBP	12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MUM1L1	Q5H9M0	696 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GNAS	Q5JWF2	1037 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	IFIT1B	Q5T764	474 aa	Known RBP	12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	RASGRP2	Q7LDG7	609 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	LENG1	Q96BZ8	264 aa	Predicted RBP	12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TNKS	O95271	1327 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MROH7	Q68CQ1	1323 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	BRCA2	P51587	3418 aa		12.82	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SOWAHB	A6NEL2	793 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PQBP1	O60828	265 aa	Known RBP	12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ADAMTS4	O75173	837 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CLTB	P09497	229 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CALML3	P27482	149 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TLE2	Q04725	743 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	BAAT	Q14032	418 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SNX17	Q15036	470 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	KCNA10	Q16322	511 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	IQSEC1	Q6DN90	963 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	RNF207	Q6ZRF8	634 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	VTA1	Q9NP79	307 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ZSWIM5	Q9P217	1185 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MKI67	P46013	3256 aa	Known RBP	12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	WDR19	Q8NEZ3	1342 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	COL11A1	P12107	1806 aa	Predicted RBP	12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PARP14	Q460N5	1801 aa		12.81	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TLR3	O15455	904 aa	Known RBP	12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GOLGA8H	P0CJ92	632 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SNHG28	P0DPA3	235 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GSPT1	P15170	499 aa	Known RBP	12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	RAG1	P15918	1043 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CHML	P26374	656 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CST5	P28325	142 aa	Predicted RBP	12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GJA9	P57773	515 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PDE4D	Q08499	809 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TRAF1	Q13077	416 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	USH1G	Q495M9	461 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	BRDT	Q58F21	947 aa	Predicted RBP	12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	EEPD1	Q7L9B9	569 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TLK2	Q86UE8	772 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MCF2L2	Q86YR7	1114 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ANKS1A	Q92625	1134 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TMEM39A	Q9NV64	488 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ELP1	O95163	1332 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CEP290	O15078	2479 aa		12.8	□□□□□ -0.36
NPIPB4-222	ENST00000614197		A0A0U1RQG5	324 aa	Predicted RBP	12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	NFIB	O00712	420 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CABYR	O75952	493 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ASGR1	P07306	291 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CDC37	Q16543	378 aa	Predicted RBP	12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	LRIT3	Q3SXY7	679 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ENAH	Q8N8S7	591 aa	Predicted RBP	12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	KLHDC9	Q8NEP7	349 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	NCOA7	Q8NI08	942 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	FGD4	Q96M96	766 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	UBA5	Q9GZZ9	404 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MAF1	Q9H063	256 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	UPF3A	Q9H1J1	476 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	PDLIM7	Q9NR12	457 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	MRPL11	Q9Y3B7	192 aa	Known RBP	12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ABCB11	O95342	1321 aa		12.79	□□□□□ -0.36
NPIPB4-222	ENST00000614197	IFIT3	O14879	490 aa	Known RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	DYNC1LI2	O43237	492 aa	Predicted RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	ALDH5A1	P51649	535 aa	Predicted RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	FSCN1	Q16658	493 aa	Known RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GPR153	Q6NV75	609 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	CASC1	Q6TDU7	716 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	FBXO11	Q86XK2	927 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	FBXO16	Q8IX29	292 aa	Predicted RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	DNER	Q8NFT8	737 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	BAD	Q92934	168 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	TOX2	Q96NM4	488 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	SEZ6L	Q9BYH1	1024 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	VAT1L	Q9HCJ6	419 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	GPHN	Q9NQX3	736 aa	Predicted RBP	12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197		Q9Y3F1	56 aa		12.78	□□□□□ -0.36
NPIPB4-222	ENST00000614197	RPS6	P62753	249 aa	Known RBP	12.77	□□□□□ -0.37
NPIPB4-222	ENST00000614197	WTAP	Q15007	396 aa		12.77	□□□□□ -0.37
NPIPB4-222	ENST00000614197	SLC30A10	Q6XR72	485 aa		12.77	□□□□□ -0.37
NPIPB4-222	ENST00000614197	ANKRD33	Q7Z3H0	272 aa		12.77	□□□□□ -0.37
NPIPB4-222	ENST00000614197	CATIP	Q7Z7H3	387 aa		12.77	□□□□□ -0.37
NPIPB4-222	ENST00000614197	ADGRF4	Q8IZF3	695 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms