RNA–Protein interactions for RNA: ENST00000613642.4

CCL16-206, Transcript of C-C motif chemokine ligand 16, humanhuman

TSL 3

Gene CCL16, Length 687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL16-206ENST00000613642 MAB21L3Q8N8X9 362 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 SPC24Q8NBT2 197 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 OR8K1Q8NGG5 319 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 GIPC2Q8TF65 315 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 NUP133Q8WUM0 1156 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 JDP2Q8WYK2 163 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 DHX38Q92620 1227 aaKnown RBP6.21□□□□□ -1.42
CCL16-206ENST00000613642 CUL5Q93034 780 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 ASIC4Q96FT7 647 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 RBM41Q96IZ5 413 aaKnown RBP6.21□□□□□ -1.42
CCL16-206ENST00000613642 CTAGE1Q96RT6 745 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 SRRTQ9BXP5 876 aaKnown RBP6.21□□□□□ -1.42
CCL16-206ENST00000613642 NIFKQ9BYG3 293 aaKnown RBP6.21□□□□□ -1.42
CCL16-206ENST00000613642 CNNM2Q9H8M5 875 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 LGR6Q9HBX8 967 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 PRM3Q9NNZ6 103 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 ZNF69Q9UC07 566 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 PGAP2Q9UHJ9 254 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 ZNF510Q9Y2H8 683 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 PRKAB1Q9Y478 270 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 PPP2R3BQ9Y5P8 575 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 MAPK8IP3Q9UPT6 1336 aa6.21□□□□□ -1.42
CCL16-206ENST00000613642 KTN1Q86UP2 1357 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 RRBP1Q9P2E9 1410 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 SPDYE3A6NKU9 549 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 TTC34A8MYJ7 566 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 C1QTNF9BB2RNN3 333 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 FIBPO43427 364 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 SNX2O60749 519 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 ERLIN2O94905 339 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 RAPGEF3O95398 923 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 HSPA8P11142 646 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 GYS1P13807 737 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 ATF7P17544 494 aaPredicted RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 VAMP1P23763 118 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 HNRNPH1P31943 449 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 MAGEA10P43363 369 aaPredicted RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 SMTNP53814 917 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CLNS1AP54105 237 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 DMPKQ09013 629 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 ACAP1Q15027 740 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 SF3B3Q15393 1217 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 LRRFIP1Q32MZ4 808 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 MAP7D1Q3KQU3 841 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 SMUG1Q53HV7 270 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CREB3L3Q68CJ9 461 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CAPRIN2Q6IMN6 1127 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 ZNF449Q6P9G9 518 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 RUFY3Q7L099 469 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 NANOGNBQ7Z5D8 188 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CD163Q86VB7 1156 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 HOOK3Q86VS8 718 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 SNX32Q86XE0 403 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CCDC50Q8IVM0 306 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 NLGN1Q8N2Q7 840 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CARNMT1Q8N4J0 409 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 ESX1Q8N693 406 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 ARHGEF2Q92974 986 aaKnown RBP6.2□□□□□ -1.42
CCL16-206ENST00000613642 CEP95Q96GE4 821 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 SLC4A9Q96Q91 983 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
CCL16-206ENST00000613642 CCDC113Q9H0I3 377 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 PCDH18Q9HCL0 1135 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 KCTD5Q9NXV2 234 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 TUBGCP4Q9UGJ1 667 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 MTUS1Q9ULD2 1270 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 CEP131Q9UPN4 1083 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 PCDHGB3Q9Y5G1 929 aa6.2□□□□□ -1.42
CCL16-206ENST00000613642 RIMBP3CA6NJZ7 1639 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 RIMBP3BA6NNM3 1639 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 RIMBP3Q9UFD9 1639 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 A0A1W2PNR3 127 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 A6NJY4 79 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 NDUFAB1O14561 156 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 LIN7AO14910 233 aaPredicted RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 CASQ2O14958 399 aaPredicted RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 ATXN7O15265 892 aaPredicted RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 TSPAN1O60635 241 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 BAIAP3O94812 1187 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 MAPTP10636 758 aaKnown RBP6.19□□□□□ -1.42
CCL16-206ENST00000613642 ATP5DP30049 168 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 CLCN2P51788 898 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 AP2B1P63010 937 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 VAC14Q08AM6 782 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 PDE3BQ13370 1112 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 CUL3Q13618 768 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 BRD3Q15059 726 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 MTFR1Q15390 333 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 SPECC1Q5M775 1068 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 ADALQ6DHV7 355 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 MTHFD1LQ6UB35 978 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 GAS2L3Q86XJ1 694 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 RAB11FIP4Q86YS3 637 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 LINC00469Q8N7U9 141 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 FLCNQ8NFG4 579 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 PPP1R14CQ8TAE6 165 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 MAGEC3Q8TD91 643 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 CDKL2Q92772 493 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 HPS3Q969F9 1004 aa6.19□□□□□ -1.42
CCL16-206ENST00000613642 AIDAQ96BJ3 306 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms