RNA–Protein interactions for RNA: ENST00000613223.1

SEMA6C-209, Transcript of semaphorin 6C, humanhuman

TSL 5 BASIC

Gene SEMA6C, Length 1,950 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6C-209ENST00000613223 CT47A1Q5JQC4 288 aaPredicted RBP20.26■□□□□ 0.83
SEMA6C-209ENST00000613223 CCSER1Q9C0I3 900 aa20.26■□□□□ 0.83
SEMA6C-209ENST00000613223 ZMYND15Q9H091 742 aa20.26■□□□□ 0.83
SEMA6C-209ENST00000613223 DISC1Q9NRI5 854 aa20.26■□□□□ 0.83
SEMA6C-209ENST00000613223 GOLGB1Q14789 3259 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 MRPL12P52815 198 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 JAG1P78504 1218 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 RRP1BQ14684 758 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 IFNKQ9P0W0 207 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 GTPBP6O43824 516 aaPredicted RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 NDUFB10O96000 172 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 UBA7P41226 1012 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 STAT6P42226 847 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 CLK2P49760 499 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 KARSQ15046 597 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 QRICH1Q2TAL8 776 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 CCDC144BQ3MJ40 725 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 XPO4Q9C0E2 1151 aaKnown RBP20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 GLT8D2Q9H1C3 349 aa20.25■□□□□ 0.83
SEMA6C-209ENST00000613223 ERCC5P28715 1186 aaPredicted RBP20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 CDC25AP30304 524 aa20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 FANCCQ00597 558 aa20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 CDC37Q16543 378 aaPredicted RBP20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 CIAPIN1Q6FI81 312 aa20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 ZNF710Q8N1W2 664 aa20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 ENOX1Q8TC92 643 aaKnown RBP20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 ZBED3Q96IU2 234 aaPredicted RBP20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 VEZTQ9HBM0 779 aa20.24■□□□□ 0.83
SEMA6C-209ENST00000613223 ATP1A3P13637 1013 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 CASP1P29466 404 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 FAM83AQ86UY5 434 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 JDP2Q8WYK2 163 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 CCDC94Q9BW85 323 aaPredicted RBP20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 PSTPIP2Q9H939 334 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 PP2D1A8MPX8 630 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 FMR1Q06787 632 aaKnown RBP eCLIP20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 RASSF8Q8NHQ8 419 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 MTRQ99707 1265 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 FANCLQ9NW38 375 aa20.23■□□□□ 0.83
SEMA6C-209ENST00000613223 TNNI2P48788 182 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 UBE2SQ16763 222 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 RRAGBQ5VZM2 374 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 POTEDQ86YR6 584 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 STAMQ92783 540 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 IMPACTQ9P2X3 320 aa20.22■□□□□ 0.83
SEMA6C-209ENST00000613223 CBFA2T2O43439 604 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 TBC1D12O60347 775 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 BMP3P12645 472 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 NAALADL2Q58DX5 795 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 MTMR9Q96QG7 549 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 ARHGEF10LQ9HCE6 1279 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 PCDHA1Q9Y5I3 950 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 A0A1W2PRG0 241 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 NFKBIEO00221 500 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 MMP14P50281 582 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 CUL4BQ13620 913 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 CALCRLQ16602 461 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 SYDE2Q5VT97 1194 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 BTNL9Q6UXG8 535 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 NUP88Q99567 741 aaPredicted RBP20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 BLZF1Q9H2G9 400 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 CUEDC2Q9H467 287 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 NFE2L3Q9Y4A8 694 aa20.21■□□□□ 0.83
SEMA6C-209ENST00000613223 RIOK3O14730 519 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 EDIL3O43854 480 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 GSDMDP57764 484 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 LRMPQ12912 555 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 TNIP1Q15025 636 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 PPP4R3AQ6IN85 833 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 FILIP1Q7Z7B0 1213 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 CABP7Q86V35 215 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 IGSF22Q8N9C0 903 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 CACTINQ8WUQ7 758 aaKnown RBP20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 TSC1Q92574 1164 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 TMEM39BQ9GZU3 492 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 MAGEF1Q9HAY2 307 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 RMND1Q9NWS8 449 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 ZBTB21Q9ULJ3 1066 aa20.2■□□□□ 0.82
SEMA6C-209ENST00000613223 WNT10BO00744 389 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 TDP2O95551 362 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 SERPINC1P01008 464 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 MYL1P05976 194 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 ZNF18P17022 549 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 AMNQ9BXJ7 453 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 MYOZ2Q9NPC6 264 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 PPP1R1BQ9UD71 204 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 TMEM232C9JQI7 657 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 SLC37A4O43826 429 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 FXR2P51116 673 aaKnown RBP eCLIP20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 UBASH3AP57075 661 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 IKQ13123 557 aaPredicted RBP20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 LRRC8AQ8IWT6 810 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 TRMT44Q8IYL2 757 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 MED15Q96RN5 788 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 NAP1L4Q99733 375 aaKnown RBP20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 TMX2Q9Y320 296 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 CD2APQ9Y5K6 639 aa20.19■□□□□ 0.82
SEMA6C-209ENST00000613223 CTIFO43310 598 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-209ENST00000613223 RPN1P04843 607 aaKnown RBP20.18■□□□□ 0.82
SEMA6C-209ENST00000613223 CD44P16070 742 aaKnown RBP20.18■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms