RNA–Protein interactions for RNA: ENST00000612688.1

PPP4R3B-204, Transcript of protein phosphatase 4 regulatory subunit 3B, humanhuman

TSL 2

Gene PPP4R3B, Length 2,981 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3B-204ENST00000612688 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 VPS16Q9H269 839 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 YY1AP1Q9H869 796 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 ANAPC4Q9UJX5 808 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 C10orf71Q711Q0 1435 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 MPHOSPH10O00566 681 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 PLCG2P16885 1265 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 CCT5P48643 541 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 PSEN1P49768 467 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 VSNL1P62760 191 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 RASSF7Q02833 373 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 SAFBQ15424 915 aaKnown RBP eCLIP13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 SPECC1LQ69YQ0 1117 aa13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 RSRC2Q7L4I2 434 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 GSPT2Q8IYD1 628 aaKnown RBP13.21□□□□□ -0.29
PPP4R3B-204ENST00000612688 SCN9AQ15858 1988 aa13.21□□□□□ -0.3
PPP4R3B-204ENST00000612688 SHTN1A0MZ66 631 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 ADAMTS3O15072 1205 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 HDXQ7Z353 690 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 SHISA4Q96DD7 197 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CXorf56Q9H5V9 222 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 TRIM10Q9UDY6 481 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 RNF225M0QZC1 329 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CUTAO60888 179 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CDKL5O76039 1030 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 VEGFAP15692 232 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 ERCC3P19447 782 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CASP14P31944 242 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 LIFRP42702 1097 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CDK8P49336 464 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 NIM1KQ8IY84 436 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 IGSF22Q8N9C0 903 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 SUPT20HQ8NEM7 779 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 PRMT6Q96LA8 375 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CPVLQ9H3G5 476 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 TCP10L2B9ZVM9 353 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 ARHGAP6O43182 974 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 EIF3JO75822 258 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 MAP2K2P36507 400 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 MRPS25P82663 173 aaKnown RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 CATIPQ7Z7H3 387 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 FANCBQ8NB91 859 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 RABGGTAQ92696 567 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 VEZTQ9HBM0 779 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 FBXO2Q9UK22 296 aaPredicted RBP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 GJA3Q9Y6H8 435 aa13.2□□□□□ -0.3
PPP4R3B-204ENST00000612688 GAKO14976 1311 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 PPP6R2O75170 966 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 PLEKHA8P1O95397 391 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 GOLGA8HP0CJ92 632 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 MDM2Q00987 491 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 DPYDQ12882 1025 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 CASP8Q14790 479 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 SEC23AQ15436 765 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 SHROOM1Q2M3G4 852 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 ANKRD20A12PQ8NF67 263 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 ANKZF1Q9H8Y5 726 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 SAMM50Q9Y512 469 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 ENC1O14682 589 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 MMP1P03956 469 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 SBK1Q52WX2 424 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 SGMS1Q86VZ5 419 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 JDP2Q8WYK2 163 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 TAOK3Q9H2K8 898 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 IL17RBQ9NRM6 502 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 PSD3Q9NYI0 1048 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 V9GY48 417 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 RGPD3A6NKT7 1758 aaPredicted RBP13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 RGPD4Q7Z3J3 1758 aa13.19□□□□□ -0.3
PPP4R3B-204ENST00000612688 BEND6Q5SZJ8 279 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CNPY4Q8N129 248 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CRACR2BQ8N4Y2 399 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 KAT2BQ92831 832 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 FAM163AQ96GL9 167 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 KCNG1Q9UIX4 513 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CTNND2Q9UQB3 1225 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CCDC151A5D8V7 595 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 LRRIQ3A6PVS8 624 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 RNF40O75150 1001 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 ERLIN2O94905 339 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 RASA1P20936 1047 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 FXR1P51114 621 aaKnown RBP eCLIP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CORO7P57737 925 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 KCTD19Q17RG1 926 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 KIFC2Q96AC6 838 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 JPH2Q9BR39 696 aaPredicted RBP13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 CENPHQ9H3R5 247 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 KAT14Q9H8E8 782 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 TAB2Q9NYJ8 693 aa13.18□□□□□ -0.3
PPP4R3B-204ENST00000612688 H0YHG0 523 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 TGFB2P61812 414 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 NCAPH2Q6IBW4 605 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 CCDC91Q7Z6B0 441 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 TADA2BQ86TJ2 420 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 PPFIBP1Q86W92 1011 aa13.17□□□□□ -0.3
PPP4R3B-204ENST00000612688 OGFOD1Q8N543 542 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms