RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 DISC1Q9NRI5 854 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 PABPC4Q13310 644 aaKnown RBP eCLIP14.59□□□□□ -0.077e-7■■□□□ 13.4
TCF3-220ENST00000611869 ASIC2Q16515 512 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 KIAA0753Q2KHM9 967 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 USP49Q70CQ1 688 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 PICK1Q9NRD5 415 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 EPN1Q9Y6I3 576 aaPredicted RBP14.59□□□□□ -0.07
TCF3-220ENST00000611869 MON2Q7Z3U7 1717 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 C12orf60Q5U649 245 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 METTL16Q86W50 562 aaKnown RBP14.59□□□□□ -0.07
TCF3-220ENST00000611869 PP2D1A8MPX8 630 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 EXOC3O60645 756 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 ALAS1P13196 640 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 ADRA2BP18089 450 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 SNAP25P60880 206 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 PRR5LQ6MZQ0 368 aa14.59□□□□□ -0.07
TCF3-220ENST00000611869 SOWAHDA6NJG2 315 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 HSF2BPO75031 334 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
TCF3-220ENST00000611869 P2RX5Q93086 422 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 ZMYND15Q9H091 742 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 VPS18Q9P253 973 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 TUBB4BP68371 445 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 KMT5BQ4FZB7 885 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 CC2D2BQ6DHV5 1058 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 ANKRD13CQ8N6S4 541 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 FAM212AQ96EL1 285 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 LSM14BQ9BX40 385 aaKnown RBP14.58□□□□□ -0.08
TCF3-220ENST00000611869 CUEDC2Q9H467 287 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 PI4KBQ9UBF8 816 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 GOLGA6L10A0A0M3HER8 536 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 LMBR1Q8WVP7 490 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 SLC4A9Q96Q91 983 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 PRM3Q9NNZ6 103 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 NWD1Q149M9 1564 aa14.58□□□□□ -0.08
TCF3-220ENST00000611869 SHTN1A0MZ66 631 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 HARSP12081 509 aaKnown RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 RC3H1Q5TC82 1133 aaKnown RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 SFMBT2Q5VUG0 894 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 BARGINQ6ZT62 677 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 FBXO33Q7Z6M2 555 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.57□□□□□ -0.089e-7■■■■■ 144.4
TCF3-220ENST00000611869 FBXO2Q9UK22 296 aaPredicted RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 FGFR2P21802 821 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 NOX5Q96PH1 765 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 GCOM1H8Y6P7 765 aaPredicted RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 POLR2MP0CAP2 368 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 SLFN12Q8IYM2 578 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 FAM107BQ9H098 131 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 MAGEF1Q9HAY2 307 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 RWDD2AQ9UIY3 292 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 TXNRD1Q16881 649 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 VWA3BQ502W6 1294 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 ACRBPQ8NEB7 543 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 DHTKD1Q96HY7 919 aaPredicted RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 PKNOX2Q96KN3 472 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 GDAP1L1Q96MZ0 367 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 ARMCX3Q9UH62 379 aaPredicted RBP14.57□□□□□ -0.08
TCF3-220ENST00000611869 BCS1LQ9Y276 419 aa14.57□□□□□ -0.08
TCF3-220ENST00000611869 USP27XA6NNY8 438 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 GJC1P36383 396 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 VAV2P52735 878 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 ADAM9Q13443 819 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 GRM4Q14833 912 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 KRT31Q15323 416 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 SEPT7Q16181 437 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 GJA10Q969M2 543 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 MASTLQ96GX5 879 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 KCNF1Q9H3M0 494 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 TRIM49BA6NDI0 452 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 MEIS1O00470 390 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 CYP2J2P51589 502 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 DNAJC21Q5F1R6 531 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 HDXQ7Z353 690 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 DHX36Q9H2U1 1008 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 SPTLC3Q9NUV7 552 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 TMEM260Q9NX78 707 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 POTEMA6NI47 508 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 BMP3P12645 472 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 EEF1GP26641 437 aaKnown RBP14.56□□□□□ -0.08
TCF3-220ENST00000611869 CRKP46108 304 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 BAG6P46379 1132 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 DYDC1Q8WWB3 177 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 SH3GLB2Q9NR46 395 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 SAR1BQ9Y6B6 198 aa14.56□□□□□ -0.08
TCF3-220ENST00000611869 TUBBP07437 444 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 GRIN1Q05586 938 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 UTP14CQ5TAP6 766 aaKnown RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 CLEC10AQ8IUN9 316 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 SLC35F6Q8N357 371 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 DPF2Q92785 391 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 PLEKHA4Q9H4M7 779 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 JCADQ9P266 1359 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 PNMA6FA0A0J9YX94 578 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 TNFAIP3P21580 790 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 CTNNA2P26232 953 aa14.55□□□□□ -0.08
TCF3-220ENST00000611869 POLR2FP61218 127 aaKnown RBP14.55□□□□□ -0.08
TCF3-220ENST00000611869 TUBB2AQ13885 445 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms