RNA–Protein interactions for RNA: ENST00000606676.1

SHROOM1-207, Transcript of shroom family member 1, humanhuman

Gene SHROOM1, Length 351 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-207ENST00000606676 NRBP1Q9UHY1 535 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 PNMA2Q9UL42 364 aa14.93□□□□□ -0.02
SHROOM1-207ENST00000606676 ASTN1O14525 1302 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 PDE4DIPQ5VU43 2346 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 LIFRP42702 1097 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 QRICH1Q2TAL8 776 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 NSMFQ6X4W1 530 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 CATIPQ7Z7H3 387 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 ZNF654Q8IZM8 581 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 PAWRQ96IZ0 340 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 PURBQ96QR8 312 aaKnown RBP14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 LRRC2Q9BYS8 371 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 VAT1LQ9HCJ6 419 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 SMCHD1A6NHR9 2005 aa14.92□□□□□ -0.02
SHROOM1-207ENST00000606676 CYTH3O43739 400 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 MSCO60682 206 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 HSPA4P34932 840 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 BAATQ14032 418 aaPredicted RBP14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 USH1GQ495M9 461 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 ANO1Q5XXA6 986 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 TMTC2Q8N394 836 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 MAP3K14Q99558 947 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 MYL10Q9BUA6 226 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 RIOX1Q9H6W3 641 aa14.91□□□□□ -0.02
SHROOM1-207ENST00000606676 DHX16O60231 1041 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 PPP1R11O60927 126 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 DDAH1O94760 285 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 REC8O95072 547 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 KRT32Q14532 448 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 ARMCX2Q7L311 632 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 DHX32Q7L7V1 743 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 SGMS1Q86VZ5 419 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 CCDC144CPQ8IYA2 1237 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 RGS22Q8NE09 1264 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 NUP133Q8WUM0 1156 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 KATNBL1Q9H079 304 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 SNX14Q9Y5W7 946 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 DDX49Q9Y6V7 483 aaKnown RBP14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 PLXNA1Q9UIW2 1896 aa14.9□□□□□ -0.02
SHROOM1-207ENST00000606676 PTPDC1A2A3K4 754 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 ZBTB5O15062 677 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 COL6A1P12109 1028 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 ACVR2BQ13705 512 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 SLC30A10Q6XR72 485 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 NECAB2Q7Z6G3 386 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 TBC1D5Q92609 795 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 TCEANC2Q96MN5 208 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 USP26Q9BXU7 913 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 ABHD16BQ9H3Z7 469 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 CNPY2Q9Y2B0 182 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 ABCB11O95342 1321 aa14.89□□□□□ -0.03
SHROOM1-207ENST00000606676 RANBP2P49792 3224 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 CCDC69A6NI79 296 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 OPLAHO14841 1288 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 EPB41L2O43491 1005 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 CALML3P27482 149 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 RPS6P62753 249 aaKnown RBP14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 NFXL1Q6ZNB6 911 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 MORC4Q8TE76 937 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 PIGSQ96S52 555 aa14.88□□□□□ -0.03
SHROOM1-207ENST00000606676 ASB14A6NK59 587 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 ADCY6O43306 1168 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 HMGB1P09429 215 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 AKR1A1P14550 325 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 CPA1P15085 419 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 RXRAP19793 462 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 LENG1Q96BZ8 264 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 AMNQ9BXJ7 453 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 C11orf49Q9H6J7 331 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 ZHX1Q9UKY1 873 aaPredicted RBP14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 MRPL11Q9Y3B7 192 aaKnown RBP14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 SLC12A7Q9Y666 1083 aa14.87□□□□□ -0.03
SHROOM1-207ENST00000606676 PNMA6FA0A0J9YX94 578 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 DNM1LO00429 736 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 PLEKHA8P1O95397 391 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 RARBP10826 455 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 KIF5BP33176 963 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 ALDH5A1P51649 535 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 LRRC41Q15345 812 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 CCDC144BQ3MJ40 725 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 GJC2Q5T442 439 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 RAB11FIP4Q86YS3 637 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 SRBD1Q8N5C6 995 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 FANCBQ8NB91 859 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 ARRDC4Q8NCT1 418 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 CTCFLQ8NI51 663 aaPredicted RBP14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 HTATIP2Q9BUP3 242 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 SPZ1Q9BXG8 430 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 MAF1Q9H063 256 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 COL20A1Q9P218 1284 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 ADD3Q9UEY8 706 aaKnown RBP14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 BRPF3Q9ULD4 1205 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 FAM184BQ9ULE4 1060 aa14.86□□□□□ -0.03
SHROOM1-207ENST00000606676 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms