RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 PLXNA1Q9UIW2 1896 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 PTPDC1A2A3K4 754 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 PRC1O43663 620 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 REC8O95072 547 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 SNAI1O95863 264 aaPredicted RBP13.45□□□□□ -0.26
CCDC12-209ENST00000604164 ZNF865P0CJ78 1059 aaPredicted RBP13.45□□□□□ -0.26
CCDC12-209ENST00000604164 KIF5BP33176 963 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 MNX1P50219 401 aaPredicted RBP13.45□□□□□ -0.26
CCDC12-209ENST00000604164 ACVR2BQ13705 512 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 RNF207Q6ZRF8 634 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 STOX1Q6ZVD7 989 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 SKAP1Q86WV1 359 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 FBXO11Q86XK2 927 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 MCF2L2Q86YR7 1114 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 MAP3K14Q99558 947 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 XPNPEP3Q9NQH7 507 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 ZHX1Q9UKY1 873 aaPredicted RBP13.45□□□□□ -0.26
CCDC12-209ENST00000604164 MRPL11Q9Y3B7 192 aaKnown RBP13.45□□□□□ -0.26
CCDC12-209ENST00000604164 BRCA2P51587 3418 aa13.45□□□□□ -0.26
CCDC12-209ENST00000604164 PALM3A6NDB9 673 aaPredicted RBP13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CCDC69A6NI79 296 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 DDAH1O94760 285 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 HMGB1P09429 215 aaKnown RBP13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CALM1P0DP23 149 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CALM2P0DP24 149 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CALM3P0DP25 149 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 COL6A1P12109 1028 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 GNAQP50148 359 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CNTN2Q02246 1040 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 BAATQ14032 418 aaPredicted RBP13.44□□□□□ -0.26
CCDC12-209ENST00000604164 GRM4Q14833 912 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CCDC144CPQ8IYA2 1237 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 DNERQ8NFT8 737 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 CTCFLQ8NI51 663 aaPredicted RBP13.44□□□□□ -0.26
CCDC12-209ENST00000604164 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 AMNQ9BXJ7 453 aa13.44□□□□□ -0.26
CCDC12-209ENST00000604164 TNRC18O15417 2968 aaPredicted RBP13.44□□□□□ -0.26
CCDC12-209ENST00000604164 H0YGN5 161 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 NFIBO00712 420 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 DUSP11O75319 330 aaKnown RBP13.43□□□□□ -0.26
CCDC12-209ENST00000604164 MYCNP04198 464 aaPredicted RBP13.43□□□□□ -0.26
CCDC12-209ENST00000604164 LIFRP42702 1097 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 LRRC41Q15345 812 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 QRICH1Q2TAL8 776 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 TSGA10IPQ3SY00 556 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 USH1GQ495M9 461 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 SYNE3Q6ZMZ3 975 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 CHST3Q7LGC8 479 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 SAMD3Q8N6K7 520 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 CLEC4DQ8WXI8 215 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 FGD4Q96M96 766 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 LZTS2Q9BRK4 669 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 TSEN34Q9BSV6 310 aaKnown RBP13.43□□□□□ -0.26
CCDC12-209ENST00000604164 SENP6Q9GZR1 1112 aaPredicted RBP13.43□□□□□ -0.26
CCDC12-209ENST00000604164 JMJD4Q9H9V9 463 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 VAT1LQ9HCJ6 419 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 VTA1Q9NP79 307 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 MAD2L2Q9UI95 211 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 TAF6LQ9Y6J9 622 aa13.43□□□□□ -0.26
CCDC12-209ENST00000604164 SOWAHBA6NEL2 793 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 ZBTB5O15062 677 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 EPB41L2O43491 1005 aaKnown RBP13.42□□□□□ -0.26
CCDC12-209ENST00000604164 TAL1P17542 331 aaPredicted RBP13.42□□□□□ -0.26
CCDC12-209ENST00000604164 CALML3P27482 149 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 SMARCA1P28370 1054 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 ANTXR2P58335 489 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 TROAPQ12815 778 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 CCDC144BQ3MJ40 725 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 GJC2Q5T442 439 aaPredicted RBP13.42□□□□□ -0.26
CCDC12-209ENST00000604164 ANO1Q5XXA6 986 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 ZNF654Q8IZM8 581 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 STAG2Q8N3U4 1231 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 MORC4Q8TE76 937 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 NUP133Q8WUM0 1156 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 NEK1Q96PY6 1258 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 LY9Q9HBG7 655 aa13.42□□□□□ -0.26
CCDC12-209ENST00000604164 MAP3K20Q9NYL2 800 aaKnown RBP13.42□□□□□ -0.26
CCDC12-209ENST00000604164 MKI67P46013 3256 aaKnown RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 MOXD2PA6NHM9 499 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 SH2B2O14492 632 aaPredicted RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 EIF5BO60841 1220 aaKnown RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 ALDH5A1P51649 535 aaPredicted RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 RPS6P62753 249 aaKnown RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 PDE4DQ08499 809 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 IQSEC1Q6DN90 963 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 NOL8Q76FK4 1167 aaKnown RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 C7orf61Q8IZ16 206 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 PCSK9Q8NBP7 692 aaKnown RBP13.41□□□□□ -0.26
CCDC12-209ENST00000604164 MTMR8Q96EF0 704 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 CPVLQ9H3G5 476 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 RIOX1Q9H6W3 641 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 Q9Y3F1 56 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 SLC12A7Q9Y666 1083 aa13.41□□□□□ -0.26
CCDC12-209ENST00000604164 PNMA6FA0A0J9YX94 578 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 ZEB2O60315 1214 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 PGK1P00558 417 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
CCDC12-209ENST00000604164 TNFAIP2Q03169 654 aa13.4□□□□□ -0.26
CCDC12-209ENST00000604164 SLC30A10Q6XR72 485 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms