RNA–Protein interactions for RNA: ENST00000603451.1

SQSTM1P1-201, Transcript of sequestosome 1 pseudogene 1, humanhuman

BASIC

Gene SQSTM1P1, Length 859 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1P1-201ENST00000603451 PFKFB2O60825 505 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FUT2Q10981 343 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SAMD1Q6SPF0 538 aaPredicted RBP10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ZNF467Q7Z7K2 595 aaPredicted RBP10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TRIM22Q8IYM9 498 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SRBD1Q8N5C6 995 aaKnown RBP10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 TRERF1Q96PN7 1200 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MMP19Q99542 508 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ARHGAP39Q9C0H5 1083 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GLT8D2Q9H1C3 349 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 SLKQ9H2G2 1235 aaPredicted RBP10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FAM217BQ9NTX9 383 aaPredicted RBP10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GJD2Q9UKL4 321 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 LIMCH1Q9UPQ0 1083 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PTPN22Q9Y2R2 807 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 STK36Q9NRP7 1315 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 LCTP09848 1927 aa10.97□□□□□ -0.65
SQSTM1P1-201ENST00000603451 LRRC37A2A6NM11 1700 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 DNAJC25-GNG10A0A024R161 153 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PLEKHA8P1O95397 391 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ALAS1P13196 640 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CAPN2P17655 700 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RXRAP19793 462 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ADORA2AP29274 412 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CTGFP29279 349 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CDC27P30260 824 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 FLT3LGP49771 235 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PRKCZQ05513 592 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NTRK3Q16288 839 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 WDR78Q5VTH9 848 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 OLFML2BQ68BL8 750 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CCDC174Q6PII3 467 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 ANKRD35Q8N283 1001 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 RAET1EQ8TD07 263 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 CCDC12Q8WUD4 166 aaPredicted RBP10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 GTF3C6Q969F1 213 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 AGBL1Q96MI9 1066 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PIGSQ96S52 555 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 MPHOSPH6Q99547 160 aaKnown RBP10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NRBP1Q9UHY1 535 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 NAP1L2Q9ULW6 460 aaPredicted RBP10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 PCDHA1Q9Y5I3 950 aa10.96□□□□□ -0.65
SQSTM1P1-201ENST00000603451 BAZ2BQ9UIF8 2168 aaKnown RBP10.96□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ESYT2A0FGR8 921 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 B4DLN1 442 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PRPF3O43395 683 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MRPL12P52815 198 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SLC35G1Q2M3R5 365 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MCTP2Q6DN12 878 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NBPF11Q86T75 865 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HOMER1Q86YM7 354 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CCDC144CPQ8IYA2 1237 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CCDC148Q8NFR7 591 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 DNERQ8NFT8 737 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 DDX11Q96FC9 970 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 LLPHQ9BRT6 129 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CPVLQ9H3G5 476 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 A1CFQ9NQ94 594 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CYP39A1Q9NYL5 469 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ADD3Q9UEY8 706 aaKnown RBP10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 TPCN1Q9ULQ1 816 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RIPK3Q9Y572 518 aa10.95□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SMCHD1A6NHR9 2005 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SYNGAP1Q96PV0 1343 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PIK3CDO00329 1044 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PEX10O60683 326 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 DEXIO95424 95 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HMGCRP04035 888 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SCG2P13521 617 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 GRK4P32298 578 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ADD1P35611 737 aaKnown RBP10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PFKFB3Q16875 520 aaPredicted RBP10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 USH1GQ495M9 461 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 DPP9Q86TI2 863 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 FAM133AQ8N9E0 248 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CLEC4DQ8WXI8 215 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 WASF1Q92558 559 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ARMC5Q96C12 935 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SH3GLB2Q9NR46 395 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HOMER2Q9NSB8 354 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ASB14A6NK59 587 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 POTEB2H3BUK9 544 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 NFIBO00712 420 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ADCY3O60266 1144 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 PPP1R11O60927 126 aaPredicted RBP10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 IGHA2P01877 340 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 XBP1P17861 261 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 HSD17B4P51659 736 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 CAP1Q01518 475 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SSRP1Q08945 709 aaKnown RBP10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SCRN1Q12765 414 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ME3Q16798 604 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 ZNF792Q3KQV3 632 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 SLC9C1Q4G0N8 1177 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MUM1L1Q5H9M0 696 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 MAMDC4Q6UXC1 1216 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RNF207Q6ZRF8 634 aa10.93□□□□□ -0.66
SQSTM1P1-201ENST00000603451 RAB11FIP4Q86YS3 637 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms