RNA–Protein interactions for RNA: ENST00000601816.3

PNKP-216, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 682 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-216ENST00000601816 TSEN34Q9BSV6 310 aaKnown RBP30.51■■■□□ 2.47
PNKP-216ENST00000601816 PRKAG2Q9UGJ0 569 aa30.51■■■□□ 2.47
PNKP-216ENST00000601816 WDR19Q8NEZ3 1342 aa30.5■■■□□ 2.47
PNKP-216ENST00000601816 NFIBO00712 420 aa30.5■■■□□ 2.47
PNKP-216ENST00000601816 SGSM2O43147 1006 aa30.5■■■□□ 2.47
PNKP-216ENST00000601816 UBE2OQ9C0C9 1292 aaKnown RBP30.5■■■□□ 2.47
PNKP-216ENST00000601816 SPC25Q9HBM1 224 aa30.5■■■□□ 2.47
PNKP-216ENST00000601816 PCDH10Q9P2E7 1040 aa30.5■■■□□ 2.47
PNKP-216ENST00000601816 U3KPZ7 1027 aaPredicted RBP30.5■■■□□ 2.47
PNKP-216ENST00000601816 ASTN1O14525 1302 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 A0A1W2PQ45 241 aaPredicted RBP30.49■■■□□ 2.47
PNKP-216ENST00000601816 A0A1W2PQY0 241 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 ADCY6O43306 1168 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 MDM2Q00987 491 aaPredicted RBP30.49■■■□□ 2.47
PNKP-216ENST00000601816 TRDNQ13061 729 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 BAATQ14032 418 aaPredicted RBP30.49■■■□□ 2.47
PNKP-216ENST00000601816 ASPRV1Q53RT3 343 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 C1orf53Q5VUE5 145 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 KLHDC9Q8NEP7 349 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 LBHD1Q9BQE6 289 aaPredicted RBP30.49■■■□□ 2.47
PNKP-216ENST00000601816 UBA5Q9GZZ9 404 aa30.49■■■□□ 2.47
PNKP-216ENST00000601816 DNAH12Q6ZR08 3092 aa30.48■■■□□ 2.47
PNKP-216ENST00000601816 IFIT1BQ5T764 474 aaKnown RBP30.48■■■□□ 2.47
PNKP-216ENST00000601816 CLEC4DQ8WXI8 215 aa30.48■■■□□ 2.47
PNKP-216ENST00000601816 CPVLQ9H3G5 476 aa30.48■■■□□ 2.47
PNKP-216ENST00000601816 ADD3Q9UEY8 706 aaKnown RBP30.48■■■□□ 2.47
PNKP-216ENST00000601816 PTPDC1A2A3K4 754 aa30.47■■■□□ 2.47
PNKP-216ENST00000601816 MOXD2PA6NHM9 499 aa30.47■■■□□ 2.47
PNKP-216ENST00000601816 CYP21A2P08686 494 aa30.47■■■□□ 2.47
PNKP-216ENST00000601816 C6orf222P0C671 652 aaPredicted RBP30.47■■■□□ 2.47
PNKP-216ENST00000601816 ACLYP53396 1101 aa30.47■■■□□ 2.47
PNKP-216ENST00000601816 PURBQ96QR8 312 aaKnown RBP30.47■■■□□ 2.47
PNKP-216ENST00000601816 MYADML2A6NDP7 307 aa30.46■■■□□ 2.47
PNKP-216ENST00000601816 PARP1P09874 1014 aaKnown RBP30.46■■■□□ 2.47
PNKP-216ENST00000601816 CST5P28325 142 aaPredicted RBP30.46■■■□□ 2.47
PNKP-216ENST00000601816 GJA9P57773 515 aa30.46■■■□□ 2.47
PNKP-216ENST00000601816 CYB5R4Q7L1T6 521 aa30.46■■■□□ 2.47
PNKP-216ENST00000601816 NUP133Q8WUM0 1156 aa30.46■■■□□ 2.47
PNKP-216ENST00000601816 UPF3AQ9H1J1 476 aaKnown RBP30.46■■■□□ 2.47
PNKP-216ENST00000601816 PRDM5Q9NQX1 630 aaPredicted RBP30.46■■■□□ 2.47
PNKP-216ENST00000601816 DDX49Q9Y6V7 483 aaKnown RBP30.46■■■□□ 2.47
PNKP-216ENST00000601816 TNFAIP2Q03169 654 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 KCNA10Q16322 511 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 CCSAPQ6IQ19 270 aaPredicted RBP30.45■■■□□ 2.47
PNKP-216ENST00000601816 SLC30A10Q6XR72 485 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 RNF207Q6ZRF8 634 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 NOL8Q76FK4 1167 aaKnown RBP30.45■■■□□ 2.47
PNKP-216ENST00000601816 TDHQ8IZJ6 230 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 STARD7Q9NQZ5 370 aa30.45■■■□□ 2.47
PNKP-216ENST00000601816 LRRC37A2A6NM11 1700 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 CALML3P27482 149 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 TLE2Q04725 743 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 SEC23AQ15436 765 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 CDC37Q16543 378 aaPredicted RBP30.44■■■□□ 2.46
PNKP-216ENST00000601816 USH1GQ495M9 461 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 PCSK9Q8NBP7 692 aaKnown RBP30.44■■■□□ 2.46
PNKP-216ENST00000601816 MORC4Q8TE76 937 aa30.44■■■□□ 2.46
PNKP-216ENST00000601816 LCTP09848 1927 aa30.43■■■□□ 2.46
PNKP-216ENST00000601816 C11orf97A0A1B0GVM6 126 aaPredicted RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 ALDH5A1P51649 535 aaPredicted RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 IRX5P78411 483 aaPredicted RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 CENPQQ7L2Z9 268 aaPredicted RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 EEPD1Q7L9B9 569 aa30.43■■■□□ 2.46
PNKP-216ENST00000601816 RALYLQ86SE5 291 aaKnown RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 FBXO16Q8IX29 292 aaPredicted RBP30.43■■■□□ 2.46
PNKP-216ENST00000601816 ADGRF4Q8IZF3 695 aa30.43■■■□□ 2.46
PNKP-216ENST00000601816 VTA1Q9NP79 307 aa30.43■■■□□ 2.46
PNKP-216ENST00000601816 PDLIM7Q9NR12 457 aa30.43■■■□□ 2.46
PNKP-216ENST00000601816 LOC102724159A0A0B4J2E5 919 aa30.42■■■□□ 2.46
PNKP-216ENST00000601816 DHX16O60231 1041 aaKnown RBP30.42■■■□□ 2.46
PNKP-216ENST00000601816 PWP2Q15269 919 aaKnown RBP30.42■■■□□ 2.46
PNKP-216ENST00000601816 GNASQ5JWF2 1037 aa30.42■■■□□ 2.46
PNKP-216ENST00000601816 GLT1D1Q96MS3 346 aa30.42■■■□□ 2.46
PNKP-216ENST00000601816 RPS6P62753 249 aaKnown RBP30.41■■■□□ 2.46
PNKP-216ENST00000601816 NCOA7Q8NI08 942 aa30.41■■■□□ 2.46
PNKP-216ENST00000601816 MAP4K1Q92918 833 aa30.41■■■□□ 2.46
PNKP-216ENST00000601816 TAF6LQ9Y6J9 622 aa30.41■■■□□ 2.46
PNKP-216ENST00000601816 E7EWF7 191 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 SOX1O00570 391 aaPredicted RBP30.4■■■□□ 2.46
PNKP-216ENST00000601816 PQBP1O60828 265 aaKnown RBP30.4■■■□□ 2.46
PNKP-216ENST00000601816 ASGR1P07306 291 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 NKX3-2P78367 333 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 IQSEC1Q6DN90 963 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 TAPT1Q6NXT6 567 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 KIAA1211Q6ZU35 1233 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 TLK2Q86UE8 772 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 PDGFCQ9NRA1 345 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 GNEQ9Y223 722 aaKnown RBP30.4■■■□□ 2.46
PNKP-216ENST00000601816 RBM8AQ9Y5S9 174 aaKnown RBP30.4■■■□□ 2.46
PNKP-216ENST00000601816 ABCB11O95342 1321 aa30.4■■■□□ 2.46
PNKP-216ENST00000601816 ERICH2A1L162 156 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 IFIT3O14879 490 aaKnown RBP30.39■■■□□ 2.46
PNKP-216ENST00000601816 CLTBP09497 229 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 SH3RF1Q7Z6J0 888 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 MPHOSPH6Q99547 160 aaKnown RBP30.39■■■□□ 2.46
PNKP-216ENST00000601816 AP5M1Q9H0R1 490 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 VAT1LQ9HCJ6 419 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 ELP1O95163 1332 aa30.39■■■□□ 2.46
PNKP-216ENST00000601816 LTBP2Q14767 1821 aa30.38■■■□□ 2.45
PNKP-216ENST00000601816 CTAGE5O15320 804 aa30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms