RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 DIS3L2Q8IYB7 885 aaKnown RBP26.39■■□□□ 1.81
IRF3-227ENST00000600911 CLEC4DQ8WXI8 215 aa26.39■■□□□ 1.81
IRF3-227ENST00000600911 HOMER2Q9NSB8 354 aa26.39■■□□□ 1.81
IRF3-227ENST00000600911 CIZ1Q9ULV3 898 aaPredicted RBP26.39■■□□□ 1.81
IRF3-227ENST00000600911 ADGRA2Q96PE1 1338 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 THSD7BQ9C0I4 1608 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 TCHHQ07283 1943 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 M0R2N6 131 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 NFIBO00712 420 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 ALAS1P13196 640 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 TM4SF4P48230 202 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 UBE2SQ16763 222 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 TNFRSF25Q93038 417 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 TMEM260Q9NX78 707 aa26.38■■□□□ 1.81
IRF3-227ENST00000600911 WDR33Q9C0J8 1336 aaKnown RBP26.37■■□□□ 1.81
IRF3-227ENST00000600911 hCG_1984214I3L0E3 225 aa26.37■■□□□ 1.81
IRF3-227ENST00000600911 ATP2A1O14983 1001 aa26.37■■□□□ 1.81
IRF3-227ENST00000600911 TRIM29Q14134 588 aa26.37■■□□□ 1.81
IRF3-227ENST00000600911 PLS1Q14651 629 aa26.37■■□□□ 1.81
IRF3-227ENST00000600911 ZNF713Q8N859 430 aaPredicted RBP26.37■■□□□ 1.81
IRF3-227ENST00000600911 F13A1P00488 732 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 FDX1P10109 184 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 NOGQ13253 232 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 MCTP1Q6DN14 999 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 PNMA3Q9UL41 463 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 PCDHA4Q9UN74 947 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 ESYT2A0FGR8 921 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 STAT3P40763 770 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 FOXD4L6Q3SYB3 417 aaPredicted RBP26.36■■□□□ 1.81
IRF3-227ENST00000600911 PPP1R18Q6NYC8 613 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 USP17L6PQ6QN14 398 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 FOXD4L3Q6VB84 417 aaPredicted RBP26.36■■□□□ 1.81
IRF3-227ENST00000600911 ANKRD13CQ8N6S4 541 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 CCDC148Q8NFR7 591 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 PGBD1Q96JS3 809 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 SPATC1LQ9H0A9 340 aa26.36■■□□□ 1.81
IRF3-227ENST00000600911 CTDP1Q9Y5B0 961 aaPredicted RBP26.36■■□□□ 1.81
IRF3-227ENST00000600911 ABCB11O95342 1321 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 MEIS2O14770 477 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 XBP1P17861 261 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 OAZ1P54368 228 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 BLIDQ8IZY5 108 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 DAGLBQ8NCG7 672 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 SMCR8Q8TEV9 937 aaPredicted RBP26.35■■□□□ 1.81
IRF3-227ENST00000600911 MOV10L1Q9BXT6 1211 aaKnown RBP26.35■■□□□ 1.81
IRF3-227ENST00000600911 TEX13BQ9BXU2 312 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 RIC8AQ9NPQ8 531 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 PCDHA6Q9UN73 950 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 PCDHA8Q9Y5H6 950 aa26.35■■□□□ 1.81
IRF3-227ENST00000600911 KRT2P35908 639 aa26.34■■□□□ 1.81
IRF3-227ENST00000600911 CLK2P49760 499 aaKnown RBP26.34■■□□□ 1.81
IRF3-227ENST00000600911 NUCB2P80303 420 aa26.34■■□□□ 1.81
IRF3-227ENST00000600911 TRERF1Q96PN7 1200 aa26.34■■□□□ 1.81
IRF3-227ENST00000600911 RNF146Q9NTX7 359 aa26.34■■□□□ 1.81
IRF3-227ENST00000600911 BIN2Q9UBW5 565 aaPredicted RBP26.34■■□□□ 1.81
IRF3-227ENST00000600911 MYH7BA7E2Y1 1941 aa26.34■■□□□ 1.81
IRF3-227ENST00000600911 ZSWIM8A7E2V4 1837 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 U2AF2P26368 475 aaKnown RBP eCLIP26.33■■□□□ 1.811e-7■■■■■ 32.6
IRF3-227ENST00000600911 HOXA13P31271 388 aaPredicted RBP26.33■■□□□ 1.81
IRF3-227ENST00000600911 ADCY7P51828 1080 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 INHBEP58166 350 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 C1QTNF8P60827 252 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 SREBF2Q12772 1141 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 TAF1CQ15572 869 aaPredicted RBP26.33■■□□□ 1.81
IRF3-227ENST00000600911 MB21D1Q8N884 522 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 PARK7Q99497 189 aaKnown RBP26.33■■□□□ 1.81
IRF3-227ENST00000600911 PSTPIP2Q9H939 334 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 CPA4Q9UI42 421 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 RABGAP1Q9Y3P9 1069 aa26.33■■□□□ 1.81
IRF3-227ENST00000600911 ERVK-9P63128 1117 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 ERVK-24P63145 666 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 RIOX2Q8IUF8 465 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 RGS22Q8NE09 1264 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 PORCNQ9H237 461 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 C6orf50Q9HD87 102 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 ZNFX1Q9P2E3 1918 aaKnown RBP26.32■■□□□ 1.8
IRF3-227ENST00000600911 WNT7AO00755 349 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 CRHR2Q13324 411 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 JAKMIP3Q5VZ66 844 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 CCDC12Q8WUD4 166 aaPredicted RBP26.32■■□□□ 1.8
IRF3-227ENST00000600911 COL20A1Q9P218 1284 aa26.32■■□□□ 1.8
IRF3-227ENST00000600911 MRPL11Q9Y3B7 192 aaKnown RBP26.32■■□□□ 1.8
IRF3-227ENST00000600911 TNPO1Q92973 898 aaKnown RBP26.31■■□□□ 1.8
IRF3-227ENST00000600911 CUL5Q93034 780 aa26.31■■□□□ 1.8
IRF3-227ENST00000600911 PURBQ96QR8 312 aaKnown RBP26.31■■□□□ 1.8
IRF3-227ENST00000600911 ZCCHC17Q9NP64 241 aaKnown RBP26.31■■□□□ 1.8
IRF3-227ENST00000600911 PLXNB2O15031 1838 aa26.31■■□□□ 1.8
IRF3-227ENST00000600911 EDIL3O43854 480 aa26.3■■□□□ 1.8
IRF3-227ENST00000600911 CFBP00751 764 aa26.3■■□□□ 1.8
IRF3-227ENST00000600911 CALML3P27482 149 aa26.3■■□□□ 1.8
IRF3-227ENST00000600911 SLC30A10Q6XR72 485 aa26.3■■□□□ 1.8
IRF3-227ENST00000600911 FOXP1Q9H334 677 aaPredicted RBP26.3■■□□□ 1.8
IRF3-227ENST00000600911 MORF4L1Q9UBU8 362 aa26.3■■□□□ 1.8
IRF3-227ENST00000600911 BCRP11274 1271 aa26.29■■□□□ 1.8
IRF3-227ENST00000600911 HSPA6P17066 643 aa26.29■■□□□ 1.8
IRF3-227ENST00000600911 ERCC3P19447 782 aa26.29■■□□□ 1.8
IRF3-227ENST00000600911 NOSTRINQ8IVI9 506 aa26.29■■□□□ 1.8
IRF3-227ENST00000600911 FTOQ9C0B1 505 aaKnown RBP eCLIP26.29■■□□□ 1.8
IRF3-227ENST00000600911 EFCC1Q9HA90 598 aa26.29■■□□□ 1.8
IRF3-227ENST00000600911 DOCK3Q8IZD9 2030 aa26.29■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms