RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 PRR12Q9ULL5 1215 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 SYNPO2Q9UMS6 1093 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 FZD1Q9UP38 647 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 TAL1P17542 331 aaPredicted RBP17.23■□□□□ 0.35
HIF3A-218ENST00000600383 GRAMD1CQ8IYS0 662 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 KIFC2Q96AC6 838 aa17.23■□□□□ 0.35
HIF3A-218ENST00000600383 HOOK1Q9UJC3 728 aaKnown RBP17.23■□□□□ 0.35
HIF3A-218ENST00000600383 YBX3P16989 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
HIF3A-218ENST00000600383 GGA3Q9NZ52 723 aa17.22■□□□□ 0.35
HIF3A-218ENST00000600383 CAVIN2O95810 425 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 INPP5BP32019 993 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 AFMP43652 599 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 HIRAP54198 1017 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-218ENST00000600383 DPCR1Q3MIW9 517 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 BTNL9Q6UXG8 535 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 PCDHA5Q9Y5H7 936 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 BECN2A8MW95 431 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 ACTN4O43707 911 aaKnown RBP17.21■□□□□ 0.35
HIF3A-218ENST00000600383 NEMFO60524 1076 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 CTNND1O60716 968 aaKnown RBP17.21■□□□□ 0.35
HIF3A-218ENST00000600383 ADCY5O95622 1261 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 MDM2Q00987 491 aaPredicted RBP17.21■□□□□ 0.35
HIF3A-218ENST00000600383 POSTNQ15063 836 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 CEP57L1Q8IYX8 460 aa17.21■□□□□ 0.35
HIF3A-218ENST00000600383 GOLGA6L19H0YKK7 550 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 LONP1P36776 959 aaKnown RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 CCDC174Q6PII3 467 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 APOBEC3FQ8IUX4 373 aaKnown RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 RASSF8Q8NHQ8 419 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 CHURC1Q8WUH1 139 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 NAT10Q9H0A0 1025 aaKnown RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 FBXO28Q9NVF7 368 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 PP2D1A8MPX8 630 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 LAD1O00515 517 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 TDP2O95551 362 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 OR52Z1P0C646 297 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 PRR29P0C7W0 189 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 CLK2P49760 499 aaKnown RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 NLRP12P59046 1061 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 DGKZQ13574 1117 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 DCAF15Q66K64 600 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 KANK3Q6NY19 840 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 POTEDQ86YR6 584 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 ZKSCAN4Q969J2 545 aaPredicted RBP17.2■□□□□ 0.34
HIF3A-218ENST00000600383 PDLIM2Q96JY6 352 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 TUBE1Q9UJT0 475 aa17.2■□□□□ 0.34
HIF3A-218ENST00000600383 AP5Z1O43299 807 aa17.19■□□□□ 0.34
HIF3A-218ENST00000600383 TXLNAP40222 546 aa17.19■□□□□ 0.34
HIF3A-218ENST00000600383 TECP42680 631 aa17.19■□□□□ 0.34
HIF3A-218ENST00000600383 PRKG1Q13976 671 aa17.19■□□□□ 0.34
HIF3A-218ENST00000600383 STAMQ92783 540 aa17.19■□□□□ 0.34
HIF3A-218ENST00000600383 SLFN14P0C7P3 912 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 LMOD1P29536 600 aaPredicted RBP17.18■□□□□ 0.34
HIF3A-218ENST00000600383 UBA7P41226 1012 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 TXKP42681 527 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 IQCB1Q15051 598 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 IQUBQ8NA54 791 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 CCDC34Q96HJ3 373 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 WRNIP1Q96S55 665 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 PLIN2Q99541 437 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 GLT8D2Q9H1C3 349 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 MEIS2O14770 477 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 SLC37A4O43826 429 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 EDIL3O43854 480 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 CASP1P29466 404 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 KARSQ15046 597 aaKnown RBP17.18■□□□□ 0.34
HIF3A-218ENST00000600383 C9orf131Q5VYM1 1079 aa17.18■□□□□ 0.34
HIF3A-218ENST00000600383 HOXA13P31271 388 aaPredicted RBP17.17■□□□□ 0.34
HIF3A-218ENST00000600383 PRPHP41219 470 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 CALCRLQ16602 461 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 ELOA2Q8IYF1 753 aaPredicted RBP17.17■□□□□ 0.34
HIF3A-218ENST00000600383 AOPEPQ8N6M6 819 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 SMARCE1Q969G3 411 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 PAGE5Q96GU1 130 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 SPP2Q13103 211 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 DLK2Q6UY11 383 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 DHX40Q8IX18 779 aaKnown RBP17.17■□□□□ 0.34
HIF3A-218ENST00000600383 UIMC1Q96RL1 719 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 FEM1BQ9UK73 627 aa17.17■□□□□ 0.34
HIF3A-218ENST00000600383 SBF1O95248 1867 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 MARCH6O60337 910 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 MTMR2Q13614 643 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 HOOK2Q96ED9 719 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 ANO3Q9BYT9 981 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 PICK1Q9NRD5 415 aa17.16■□□□□ 0.34
HIF3A-218ENST00000600383 DDX25Q9UHL0 483 aaKnown RBP17.16■□□□□ 0.34
HIF3A-218ENST00000600383 SPDYE3A6NKU9 549 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 PTMAP06454 111 aaKnown RBP17.15■□□□□ 0.34
HIF3A-218ENST00000600383 STAT6P42226 847 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 FAM160B2Q86V87 743 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 DICER1Q9UPY3 1922 aaKnown RBP17.15■□□□□ 0.34
HIF3A-218ENST00000600383 CFBP00751 764 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 E2F4Q16254 413 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 RRAGBQ5VZM2 374 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 FCHSD1Q86WN1 690 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 GJA10Q969M2 543 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 TRIM5Q9C035 493 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 TANGO6Q9C0B7 1094 aa17.15■□□□□ 0.34
HIF3A-218ENST00000600383 KIAA1683Q9H0B3 1180 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms