RNA–Protein interactions for RNA: ENST00000599575.5

SHKBP1-219, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 810 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-219ENST00000599575 ALAS1P13196 640 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 CDC27P30260 824 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 RGS2P41220 211 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 SLC35G1Q2M3R5 365 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 FBXO46Q6PJ61 603 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 FAM177A1Q8N128 213 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 USP6NLQ92738 828 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 MMP19Q99542 508 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 RNF26Q9BY78 433 aaPredicted RBP19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 PTPN22Q9Y2R2 807 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 PCDHA1Q9Y5I3 950 aa19.16■□□□□ 0.66
SHKBP1-219ENST00000599575 AKAP17AQ02040 695 aaKnown RBP19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 MAP2K5Q13163 448 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 NTRK3Q16288 839 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 RAB11FIP4Q86YS3 637 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 TRIM22Q8IYM9 498 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 ANKRD35Q8N283 1001 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 PXYLP1Q8TE99 480 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 CNTNAP5Q8WYK1 1306 aa19.15■□□□□ 0.66
SHKBP1-219ENST00000599575 LOC102724159A0A0B4J2E5 919 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 PRPF3O43395 683 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 ADORA2AP29274 412 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 FLT3LGP49771 235 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 SNAP25P60880 206 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 GHRHRQ02643 423 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 PRKCZQ05513 592 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 PWP2Q15269 919 aaKnown RBP19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 RAET1EQ8TD07 263 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 DDX11Q96FC9 970 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 APBA2Q99767 749 aa19.14■□□□□ 0.65
SHKBP1-219ENST00000599575 CCT2P78371 535 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 ME3Q16798 604 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 PPP1R18Q6NYC8 613 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 DPP9Q86TI2 863 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 CCDC82Q8N4S0 544 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 MSL3Q8N5Y2 521 aaKnown RBP19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 SLAIN1Q8ND83 568 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 GTF3C6Q969F1 213 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 GLT8D2Q9H1C3 349 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 HOMER2Q9NSB8 354 aa19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 V9GY48 417 aaPredicted RBP19.13■□□□□ 0.65
SHKBP1-219ENST00000599575 ZNF236Q9UL36 1845 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 DNAJC25-GNG10A0A024R161 153 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 SLC4A3P48751 1232 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 CAP1Q01518 475 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 SCRN1Q12765 414 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 USH1GQ495M9 461 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 ZNF467Q7Z7K2 595 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 CMTR1Q8N1G2 835 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 CCDC12Q8WUD4 166 aaPredicted RBP19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 CLEC4DQ8WXI8 215 aa19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 A1CFQ9NQ94 594 aaKnown RBP19.12■□□□□ 0.65
SHKBP1-219ENST00000599575 STK36Q9NRP7 1315 aa19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 PPP1R11O60927 126 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 SSRP1Q08945 709 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 STK3Q13188 491 aa19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 PFKFB3Q16875 520 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 LLPHQ9BRT6 129 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 NCOA5Q9HCD5 579 aaKnown RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 CYP39A1Q9NYL5 469 aa19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 COL11A1P12107 1806 aaPredicted RBP19.11■□□□□ 0.65
SHKBP1-219ENST00000599575 DEXIO95424 95 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 SCG2P13521 617 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 ZNF792Q3KQV3 632 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 MUM1L1Q5H9M0 696 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 OLFML2BQ68BL8 750 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 RNF207Q6ZRF8 634 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 WASF1Q92558 559 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 LARP6Q9BRS8 491 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 BARHL2Q9NY43 387 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 ADD3Q9UEY8 706 aaKnown RBP19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 GABRQQ9UN88 632 aa19.1■□□□□ 0.65
SHKBP1-219ENST00000599575 B4DLN1 442 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 POTEB2H3BUK9 544 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 NFIBO00712 420 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 ADCY3O60266 1144 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 MRPL12P52815 198 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 NSMFQ6X4W1 530 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 FAM133AQ8N9E0 248 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 DNERQ8NFT8 737 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 MPHOSPH6Q99547 160 aaKnown RBP19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 SLC26A6Q9BXS9 759 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 SH3GLB2Q9NR46 395 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 CASP8AP2Q9UKL3 1982 aa19.09■□□□□ 0.65
SHKBP1-219ENST00000599575 PIK3CDO00329 1044 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 COBLO75128 1261 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 CYP2B6P20813 491 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 GRK4P32298 578 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 HSD17B4P51659 736 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 RPS6P62753 249 aaKnown RBP19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 MCTP2Q6DN12 878 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 HEATR3Q7Z4Q2 680 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 PHKBQ93100 1093 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 NRBP1Q9UHY1 535 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 PTCH2Q9Y6C5 1203 aa19.08■□□□□ 0.64
SHKBP1-219ENST00000599575 MGAMO43451 1857 aa19.07■□□□□ 0.64
SHKBP1-219ENST00000599575 ESYT2A0FGR8 921 aa19.07■□□□□ 0.64
SHKBP1-219ENST00000599575 PTPDC1A2A3K4 754 aa19.07■□□□□ 0.64
SHKBP1-219ENST00000599575 GCOM1H8Y6P7 765 aaPredicted RBP19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms