RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 USH1GQ495M9 461 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 ADGRF4Q8IZF3 695 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 LENG1Q96BZ8 264 aaPredicted RBP26.39■■□□□ 1.82
CCDC9-204ENST00000599398 ABHD16BQ9H3Z7 469 aa26.39■■□□□ 1.82
CCDC9-204ENST00000599398 MYH6P13533 1939 aa26.39■■□□□ 1.81
CCDC9-204ENST00000599398 WDR19Q8NEZ3 1342 aa26.39■■□□□ 1.81
CCDC9-204ENST00000599398 DNAH12Q6ZR08 3092 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 ASB14A6NK59 587 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 PGK1P00558 417 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 BAATQ14032 418 aaPredicted RBP26.38■■□□□ 1.81
CCDC9-204ENST00000599398 WTAPQ15007 396 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 CDC37Q16543 378 aaPredicted RBP26.38■■□□□ 1.81
CCDC9-204ENST00000599398 LRRC26Q2I0M4 334 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 VAT1LQ9HCJ6 419 aa26.38■■□□□ 1.81
CCDC9-204ENST00000599398 CDC45O75419 566 aa26.37■■□□□ 1.81
CCDC9-204ENST00000599398 ATN1P54259 1190 aaPredicted RBP26.37■■□□□ 1.81
CCDC9-204ENST00000599398 CHRDL2Q6WN34 429 aa26.37■■□□□ 1.81
CCDC9-204ENST00000599398 COLQQ9Y215 455 aaPredicted RBP26.37■■□□□ 1.81
CCDC9-204ENST00000599398 LCTP09848 1927 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 SLC27A2O14975 620 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 TMEM67Q5HYA8 995 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 RNF180Q86T96 592 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 MB21D2Q8IYB1 491 aaPredicted RBP26.36■■□□□ 1.81
CCDC9-204ENST00000599398 STAG2Q8N3U4 1231 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 CLEC4DQ8WXI8 215 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 PURBQ96QR8 312 aaKnown RBP26.36■■□□□ 1.81
CCDC9-204ENST00000599398 SENP2Q9HC62 589 aa26.36■■□□□ 1.81
CCDC9-204ENST00000599398 ZMYND8Q9ULU4 1186 aaPredicted RBP26.36■■□□□ 1.81
CCDC9-204ENST00000599398 CALML3P27482 149 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 ANTXR2P58335 489 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 CCDC144BQ3MJ40 725 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 CREB3L3Q68CJ9 461 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 RNF207Q6ZRF8 634 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 FERMT2Q96AC1 680 aa26.35■■□□□ 1.81
CCDC9-204ENST00000599398 DDX49Q9Y6V7 483 aaKnown RBP26.35■■□□□ 1.81
CCDC9-204ENST00000599398 KLRF2D3W0D1 207 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 ADCYAP1R1P41586 468 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 QRICH1Q2TAL8 776 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 SLC30A10Q6XR72 485 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 JMJD4Q9H9V9 463 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 ADD3Q9UEY8 706 aaKnown RBP26.34■■□□□ 1.81
CCDC9-204ENST00000599398 ASTN1O14525 1302 aa26.34■■□□□ 1.81
CCDC9-204ENST00000599398 SYN1P17600 705 aa26.33■■□□□ 1.81
CCDC9-204ENST00000599398 NECTIN1Q15223 517 aa26.33■■□□□ 1.81
CCDC9-204ENST00000599398 HABP4Q5JVS0 413 aaKnown RBP26.33■■□□□ 1.81
CCDC9-204ENST00000599398 KATNBL1Q9H079 304 aa26.33■■□□□ 1.81
CCDC9-204ENST00000599398 MAD2L2Q9UI95 211 aa26.33■■□□□ 1.81
CCDC9-204ENST00000599398 SYNRGQ9UMZ2 1314 aa26.33■■□□□ 1.81
CCDC9-204ENST00000599398 TRIOBPQ9H2D6 2365 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 PRC1O43663 620 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 DUSP11O75319 330 aaKnown RBP26.32■■□□□ 1.8
CCDC9-204ENST00000599398 RPS6P62753 249 aaKnown RBP26.32■■□□□ 1.8
CCDC9-204ENST00000599398 NOL8Q76FK4 1167 aaKnown RBP26.32■■□□□ 1.8
CCDC9-204ENST00000599398 EEPD1Q7L9B9 569 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 CATIPQ7Z7H3 387 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 FBXO11Q86XK2 927 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 IGDCC4Q8TDY8 1250 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 ABCB11O95342 1321 aa26.32■■□□□ 1.8
CCDC9-204ENST00000599398 BAZ2BQ9UIF8 2168 aaKnown RBP26.31■■□□□ 1.8
CCDC9-204ENST00000599398 PALM3A6NDB9 673 aaPredicted RBP26.31■■□□□ 1.8
CCDC9-204ENST00000599398 ADAMTS4O75173 837 aa26.31■■□□□ 1.8
CCDC9-204ENST00000599398 MCM5P33992 734 aa26.31■■□□□ 1.8
CCDC9-204ENST00000599398 ALDH5A1P51649 535 aaPredicted RBP26.31■■□□□ 1.8
CCDC9-204ENST00000599398 GRM4Q14833 912 aa26.31■■□□□ 1.8
CCDC9-204ENST00000599398 RNF20Q5VTR2 975 aa26.31■■□□□ 1.8
CCDC9-204ENST00000599398 SPC25Q9HBM1 224 aa26.31■■□□□ 1.8
CCDC9-204ENST00000599398 ADCY6O43306 1168 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 C6orf222P0C671 652 aaPredicted RBP26.3■■□□□ 1.8
CCDC9-204ENST00000599398 RTP1P59025 263 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 SLC39A5Q6ZMH5 540 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 FBXO16Q8IX29 292 aaPredicted RBP26.3■■□□□ 1.8
CCDC9-204ENST00000599398 PHF24Q9UPV7 400 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 ATP11BQ9Y2G3 1177 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 LRRC37A2A6NM11 1700 aa26.3■■□□□ 1.8
CCDC9-204ENST00000599398 TNFAIP2Q03169 654 aa26.29■■□□□ 1.8
CCDC9-204ENST00000599398 TROAPQ12815 778 aa26.29■■□□□ 1.8
CCDC9-204ENST00000599398 NFXL1Q6ZNB6 911 aa26.29■■□□□ 1.8
CCDC9-204ENST00000599398 NUP133Q8WUM0 1156 aa26.29■■□□□ 1.8
CCDC9-204ENST00000599398 LY9Q9HBG7 655 aa26.29■■□□□ 1.8
CCDC9-204ENST00000599398 GPHNQ9NQX3 736 aaPredicted RBP26.29■■□□□ 1.8
CCDC9-204ENST00000599398 MRPL11Q9Y3B7 192 aaKnown RBP26.29■■□□□ 1.8
CCDC9-204ENST00000599398 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.28■■□□□ 1.8
CCDC9-204ENST00000599398 CENPBP07199 599 aaPredicted RBP26.28■■□□□ 1.8
CCDC9-204ENST00000599398 HOMER1Q86YM7 354 aa26.28■■□□□ 1.8
CCDC9-204ENST00000599398 RGS22Q8NE09 1264 aa26.28■■□□□ 1.8
CCDC9-204ENST00000599398 MPHOSPH6Q99547 160 aaKnown RBP26.28■■□□□ 1.8
CCDC9-204ENST00000599398 AMNQ9BXJ7 453 aa26.28■■□□□ 1.8
CCDC9-204ENST00000599398 VTA1Q9NP79 307 aa26.28■■□□□ 1.8
CCDC9-204ENST00000599398 RBM27Q9P2N5 1060 aaKnown RBP26.28■■□□□ 1.8
CCDC9-204ENST00000599398 MYADML2A6NDP7 307 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 ZBTB5O15062 677 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 MCF2L2Q86YR7 1114 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 ZNF654Q8IZM8 581 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 MORC4Q8TE76 937 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 TMEM87BQ96K49 555 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 TSEN34Q9BSV6 310 aaKnown RBP26.27■■□□□ 1.8
CCDC9-204ENST00000599398 MTA3Q9BTC8 594 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 PDGFCQ9NRA1 345 aa26.27■■□□□ 1.8
CCDC9-204ENST00000599398 RANBP2P49792 3224 aaKnown RBP26.26■■□□□ 1.79
CCDC9-204ENST00000599398 LOC102724159A0A0B4J2E5 919 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms