RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 GJD2Q9UKL4 321 aa17.49■□□□□ 0.39
GTF2F1-206ENST00000598607 GABRQQ9UN88 632 aa17.49■□□□□ 0.39
GTF2F1-206ENST00000598607 MCM3APO60318 1980 aa17.49■□□□□ 0.39
GTF2F1-206ENST00000598607 CNTNAP5Q8WYK1 1306 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 ST18O60284 1047 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 SLC35G1Q2M3R5 365 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 USH1GQ495M9 461 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 CPLX2Q6PUV4 134 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 DPP9Q86TI2 863 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 ANKRD35Q8N283 1001 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 CCDC82Q8N4S0 544 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 DDX11Q96FC9 970 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 MAF1Q9H063 256 aa17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 SLKQ9H2G2 1235 aaPredicted RBP17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 FAM217BQ9NTX9 383 aaPredicted RBP17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 RBM27Q9P2N5 1060 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 MRPL11Q9Y3B7 192 aaKnown RBP17.48■□□□□ 0.39
GTF2F1-206ENST00000598607 PFASO15067 1338 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 CPLX1O14810 134 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 XRCC5P13010 732 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 ADORA2AP29274 412 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 ADD1P35611 737 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 CCT2P78371 535 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 TRMT44Q8IYL2 757 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 CMTR1Q8N1G2 835 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 USP6NLQ92738 828 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 APBA2Q99767 749 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 LARP6Q9BRS8 491 aaKnown RBP17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 MCOLN1Q9GZU1 580 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 TPCN1Q9ULQ1 816 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 PTCH2Q9Y6C5 1203 aa17.47■□□□□ 0.39
GTF2F1-206ENST00000598607 PFKFB2O60825 505 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 HOXC6P09630 235 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 CYP2B6P20813 491 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 STK3Q13188 491 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 MUM1L1Q5H9M0 696 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 COL13A1Q5TAT6 717 aaPredicted RBP17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 NOL8Q76FK4 1167 aaKnown RBP17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 MCF2L2Q86YR7 1114 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 SLAIN1Q8ND83 568 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 PXYLP1Q8TE99 480 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 PIBF1Q8WXW3 757 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 PCDHA1Q9Y5I3 950 aa17.46■□□□□ 0.39
GTF2F1-206ENST00000598607 hCG_1984214I3L0E3 225 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 ADCY3O60266 1144 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 IFNAR1P17181 557 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 AKAP17AQ02040 695 aaKnown RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 FUT2Q10981 343 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 NSMFQ6X4W1 530 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 ZNF713Q8N859 430 aaPredicted RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 RGS22Q8NE09 1264 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 ZSCAN31Q96LW9 406 aaPredicted RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 RNF26Q9BY78 433 aaPredicted RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 NCOA5Q9HCD5 579 aaKnown RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 A1CFQ9NQ94 594 aaKnown RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 LIMCH1Q9UPQ0 1083 aa17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 DIS3Q9Y2L1 958 aaKnown RBP17.45■□□□□ 0.38
GTF2F1-206ENST00000598607 PPP1R11O60927 126 aaPredicted RBP17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 CDKL5O76039 1030 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 GRK4P32298 578 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 NTRK3Q16288 839 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 SLC9C1Q4G0N8 1177 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 TRIM22Q8IYM9 498 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 SAMD3Q8N6K7 520 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 CLEC4DQ8WXI8 215 aa17.44■□□□□ 0.38
GTF2F1-206ENST00000598607 DNAJC25-GNG10A0A024R161 153 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 POTEB2H3BUK9 544 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 NFIBO00712 420 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 PRPF3O43395 683 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 COBLO75128 1261 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 TAL1P17542 331 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 MCM2P49736 904 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 SCRN1Q12765 414 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 ME3Q16798 604 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 RNF207Q6ZRF8 634 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 SH2B1Q9NRF2 756 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 MAP3K20Q9NYL2 800 aaKnown RBP17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 CYP39A1Q9NYL5 469 aa17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 V9GY48 417 aaPredicted RBP17.43■□□□□ 0.38
GTF2F1-206ENST00000598607 HMGCRP04035 888 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 PGK2P07205 417 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 SSRP1Q08945 709 aaKnown RBP17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 ZNF792Q3KQV3 632 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 OLFML2BQ68BL8 750 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 NPLOC4Q8TAT6 608 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 GTF3C6Q969F1 213 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 SLC26A6Q9BXS9 759 aa17.42■□□□□ 0.38
GTF2F1-206ENST00000598607 KIAA1217Q5T5P2 1943 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 hCG_1642624A0A1W2PR95 340 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 RPS6P62753 249 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 UBXN2AP68543 259 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 BAATQ14032 418 aaPredicted RBP17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 PFKFB3Q16875 520 aaPredicted RBP17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 MFSD14CQ5VZR4 134 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 PPP1R18Q6NYC8 613 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 HEATR3Q7Z4Q2 680 aa17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 ZNF467Q7Z7K2 595 aaPredicted RBP17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 MSL3Q8N5Y2 521 aaKnown RBP17.41■□□□□ 0.38
GTF2F1-206ENST00000598607 FAM133AQ8N9E0 248 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms