RNA–Protein interactions for RNA: ENST00000598201.5

SHKBP1-216, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 2

Gene SHKBP1, Length 2,069 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-216ENST00000598201 VEZTQ9HBM0 779 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 HACL1Q9UJ83 578 aa19.33■□□□□ 0.69
SHKBP1-216ENST00000598201 IQCA1LA6NCM1 817 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 PP2D1A8MPX8 630 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 SMTNL1A8MU46 457 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 GOLGA6L6A8MZA4 724 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 POTECB2RU33 542 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 F5H6K3 240 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 EDIL3O43854 480 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 ZNF280AP59817 542 aaPredicted RBP19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 KLRC3Q07444 240 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 PDXDC2PQ6P474 469 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 CCDC186Q7Z3E2 898 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 STAMQ92783 540 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 RRAGCQ9HB90 399 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 HERC5Q9UII4 1024 aaKnown RBP19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 A0A1W2PRG0 241 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 DPYDQ12882 1025 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 MTMR14Q8NCE2 650 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 MTRQ99707 1265 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 RIC8AQ9NPQ8 531 aa19.32■□□□□ 0.68
SHKBP1-216ENST00000598201 NDUFB10O96000 172 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 KARSQ15046 597 aaKnown RBP19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 UBE2SQ16763 222 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 QRICH1Q2TAL8 776 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 CCDC144BQ3MJ40 725 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 PPP1R18Q6NYC8 613 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 SAMD7Q7Z3H4 446 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 IQUBQ8NA54 791 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 GMCL1P1Q8NEA9 526 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 ZBED3Q96IU2 234 aaPredicted RBP19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 TMEM39BQ9GZU3 492 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 MYOZ2Q9NPC6 264 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 WDR90Q96KV7 1748 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 LAD1O00515 517 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 PRPHP41219 470 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 MYL5Q02045 173 aa19.31■□□□□ 0.68
SHKBP1-216ENST00000598201 NEMFO60524 1076 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 SMC2O95347 1197 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 ATP1A3P13637 1013 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 FMR1Q06787 632 aaKnown RBP eCLIP19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 NBPF9Q3BBW0 867 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 TRIML1Q8N9V2 468 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 NMRK2Q9NPI5 230 aa19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 ADARB2Q9NS39 739 aaKnown RBP19.3■□□□□ 0.68
SHKBP1-216ENST00000598201 EGFRP00533 1210 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 TPM3P06753 285 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 OR52Z1P0C646 297 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 EPHX2P34913 555 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 CLK2P49760 499 aaKnown RBP19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 TBC1D10BQ4KMP7 808 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 MLKLQ8NB16 471 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 CCDC34Q96HJ3 373 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 GMCL1Q96IK5 515 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 WNT10BO00744 389 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 SNAP25P60880 206 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 CDC37Q16543 378 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 FKBP1CQ5VVH2 108 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 POTEDQ86YR6 584 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 MED15Q96RN5 788 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 BLZF1Q9H2G9 400 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 TAF1DQ9H5J8 278 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 GPBP1L1Q9HC44 474 aaPredicted RBP19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 IFNKQ9P0W0 207 aa19.29■□□□□ 0.68
SHKBP1-216ENST00000598201 SCN4AP35499 1836 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 ECE1P42892 770 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 TPM4P67936 248 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 NAALADL2Q58DX5 795 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 C17orf53Q8N3J3 647 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 XPO4Q9C0E2 1151 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 DISC1Q9NRI5 854 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 FANCLQ9NW38 375 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 PGAP2Q9UHJ9 254 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 PYCARDQ9ULZ3 195 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 SCAF8Q9UPN6 1271 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 TDP2O95551 362 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 TXLNAP40222 546 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 TNNI2P48788 182 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 LRMPQ12912 555 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 KIF4BQ2VIQ3 1234 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 MIGA2Q7L4E1 593 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 SPICE1Q8N0Z3 855 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 TRPM4Q8TD43 1214 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 ACER1Q8TDN7 264 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 CUL5Q93034 780 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 PKNOX2Q96KN3 472 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 PYM1Q9BRP8 204 aaKnown RBP19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 PSTPIP2Q9H939 334 aa19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.28■□□□□ 0.68
SHKBP1-216ENST00000598201 SLC37A4O43826 429 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 CUL4BQ13620 913 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 KIAA1755Q5JYT7 1200 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 LRRC15Q8TF66 581 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 GSDMAQ96QA5 445 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 CCSER1Q9C0I3 900 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 PCDHA1Q9Y5I3 950 aa19.27■□□□□ 0.68
SHKBP1-216ENST00000598201 TMEM232C9JQI7 657 aa19.26■□□□□ 0.67
SHKBP1-216ENST00000598201 CD44P16070 742 aaKnown RBP19.26■□□□□ 0.67
SHKBP1-216ENST00000598201 UBA7P41226 1012 aa19.26■□□□□ 0.67
SHKBP1-216ENST00000598201 STAT6P42226 847 aa19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms