RNA–Protein interactions for RNA: ENST00000598108.5

IRF3-220, Transcript of interferon regulatory factor 3, humanhuman

TSL 3

Gene IRF3, Length 1,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-220ENST00000598108 BAATQ14032 418 aaPredicted RBP26.58■■□□□ 1.85
IRF3-220ENST00000598108 QRICH1Q2TAL8 776 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 USH1GQ495M9 461 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 ANO1Q5XXA6 986 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 MSL3Q8N5Y2 521 aaKnown RBP26.58■■□□□ 1.85
IRF3-220ENST00000598108 PAWRQ96IZ0 340 aaKnown RBP26.58■■□□□ 1.85
IRF3-220ENST00000598108 ASTN1O14525 1302 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 PFASO15067 1338 aa26.58■■□□□ 1.85
IRF3-220ENST00000598108 ZNFX1Q9P2E3 1918 aaKnown RBP26.57■■□□□ 1.84
IRF3-220ENST00000598108 SEPT4O43236 478 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 ZNF654Q8IZM8 581 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 NUP133Q8WUM0 1156 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 MTMR8Q96EF0 704 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 TCEANC2Q96MN5 208 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 NRBP1Q9UHY1 535 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 PNMA2Q9UL42 364 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 DDX49Q9Y6V7 483 aaKnown RBP26.57■■□□□ 1.84
IRF3-220ENST00000598108 SYNGAP1Q96PV0 1343 aa26.57■■□□□ 1.84
IRF3-220ENST00000598108 REC8O95072 547 aa26.56■■□□□ 1.84
IRF3-220ENST00000598108 LIFRP42702 1097 aa26.56■■□□□ 1.84
IRF3-220ENST00000598108 TMTC2Q8N394 836 aa26.56■■□□□ 1.84
IRF3-220ENST00000598108 ANKLE1Q8NAG6 615 aa26.56■■□□□ 1.84
IRF3-220ENST00000598108 SMCHD1A6NHR9 2005 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 CYTH3O43739 400 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 MSCO60682 206 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 NFXL1Q6ZNB6 911 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 DHX32Q7L7V1 743 aaKnown RBP26.55■■□□□ 1.84
IRF3-220ENST00000598108 CDKN2AIPQ9NXV6 580 aaPredicted RBP26.55■■□□□ 1.84
IRF3-220ENST00000598108 CNPY2Q9Y2B0 182 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 SNX14Q9Y5W7 946 aa26.55■■□□□ 1.84
IRF3-220ENST00000598108 PPP1R11O60927 126 aaPredicted RBP26.54■■□□□ 1.84
IRF3-220ENST00000598108 DDAH1O94760 285 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 KRT32Q14532 448 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 SLC30A10Q6XR72 485 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 ARMCX2Q7L311 632 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 CCDC144CPQ8IYA2 1237 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 TBC1D5Q92609 795 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 RIOX1Q9H6W3 641 aa26.54■■□□□ 1.84
IRF3-220ENST00000598108 PTPDC1A2A3K4 754 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 CCDC69A6NI79 296 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 CPA1P15085 419 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 RXRAP19793 462 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 NECAB2Q7Z6G3 386 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 FBXO11Q86XK2 927 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 RAB11FIP4Q86YS3 637 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 MAP3K14Q99558 947 aa26.53■■□□□ 1.84
IRF3-220ENST00000598108 CALML3P27482 149 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 RPS6P62753 249 aaKnown RBP26.52■■□□□ 1.84
IRF3-220ENST00000598108 ACVR2BQ13705 512 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 RNF207Q6ZRF8 634 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 PIGSQ96S52 555 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 USP26Q9BXU7 913 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 KATNBL1Q9H079 304 aa26.52■■□□□ 1.84
IRF3-220ENST00000598108 ZHX1Q9UKY1 873 aaPredicted RBP26.52■■□□□ 1.84
IRF3-220ENST00000598108 PDE4DIPQ5VU43 2346 aa26.51■■□□□ 1.84
IRF3-220ENST00000598108 ABCB11O95342 1321 aa26.51■■□□□ 1.83
IRF3-220ENST00000598108 ZBTB5O15062 677 aa26.51■■□□□ 1.83
IRF3-220ENST00000598108 SGMS1Q86VZ5 419 aa26.51■■□□□ 1.83
IRF3-220ENST00000598108 HOMER1Q86YM7 354 aa26.51■■□□□ 1.83
IRF3-220ENST00000598108 LENG1Q96BZ8 264 aaPredicted RBP26.51■■□□□ 1.83
IRF3-220ENST00000598108 JAKMIP1Q96N16 626 aaKnown RBP26.51■■□□□ 1.83
IRF3-220ENST00000598108 ASB14A6NK59 587 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 RGS22Q8NE09 1264 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 CTCFLQ8NI51 663 aaPredicted RBP26.5■■□□□ 1.83
IRF3-220ENST00000598108 AMNQ9BXJ7 453 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 ABHD16BQ9H3Z7 469 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 BRPF3Q9ULD4 1205 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 SLC12A7Q9Y666 1083 aa26.5■■□□□ 1.83
IRF3-220ENST00000598108 PLEKHA8P1O95397 391 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 COL6A1P12109 1028 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 AKR1A1P14550 325 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 GJC2Q5T442 439 aaPredicted RBP26.49■■□□□ 1.83
IRF3-220ENST00000598108 PIBF1Q8WXW3 757 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 DPF3Q92784 378 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 C11orf49Q9H6J7 331 aa26.49■■□□□ 1.83
IRF3-220ENST00000598108 MRPL11Q9Y3B7 192 aaKnown RBP26.49■■□□□ 1.83
IRF3-220ENST00000598108 OPLAHO14841 1288 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 ADCY6O43306 1168 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 EPB41L2O43491 1005 aaKnown RBP26.48■■□□□ 1.83
IRF3-220ENST00000598108 HMGB1P09429 215 aaKnown RBP26.48■■□□□ 1.83
IRF3-220ENST00000598108 KIF5BP33176 963 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 CMTR1Q8N1G2 835 aaKnown RBP26.48■■□□□ 1.83
IRF3-220ENST00000598108 SRBD1Q8N5C6 995 aaKnown RBP26.48■■□□□ 1.83
IRF3-220ENST00000598108 MORC4Q8TE76 937 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 FAM184BQ9ULE4 1060 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 PCDHA1Q9Y5I3 950 aa26.48■■□□□ 1.83
IRF3-220ENST00000598108 PLXNA1Q9UIW2 1896 aa26.47■■□□□ 1.83
IRF3-220ENST00000598108 RARBP10826 455 aa26.47■■□□□ 1.83
IRF3-220ENST00000598108 ALDH5A1P51649 535 aaPredicted RBP26.47■■□□□ 1.83
IRF3-220ENST00000598108 CCDC144BQ3MJ40 725 aa26.47■■□□□ 1.83
IRF3-220ENST00000598108 FANCBQ8NB91 859 aa26.47■■□□□ 1.83
IRF3-220ENST00000598108 HTATIP2Q9BUP3 242 aa26.47■■□□□ 1.83
IRF3-220ENST00000598108 PNMA6FA0A0J9YX94 578 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 PGK1P00558 417 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 MYCNP04198 464 aaPredicted RBP26.46■■□□□ 1.83
IRF3-220ENST00000598108 CALM1P0DP23 149 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 CALM2P0DP24 149 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 CALM3P0DP25 149 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 LRRC41Q15345 812 aa26.46■■□□□ 1.83
IRF3-220ENST00000598108 APOA5Q6Q788 366 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms