RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 ACAD9Q9H845 621 aa25.57■■□□□ 1.68
CHMP2A-204ENST00000597848 ABCB11O95342 1321 aa25.57■■□□□ 1.68
CHMP2A-204ENST00000597848 HOXD10P28358 340 aa25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 MUM1L1Q5H9M0 696 aa25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 MMP19Q99542 508 aa25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 RNF26Q9BY78 433 aaPredicted RBP25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 RBM27Q9P2N5 1060 aaKnown RBP25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 MRPL11Q9Y3B7 192 aaKnown RBP25.56■■□□□ 1.68
CHMP2A-204ENST00000597848 STRNO43815 780 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 FCER1AP12319 257 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 CAP1Q01518 475 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 KCTD2Q14681 263 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 HEATR3Q7Z4Q2 680 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 TMX3Q96JJ7 454 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 TRIM17Q9Y577 477 aa25.55■■□□□ 1.68
CHMP2A-204ENST00000597848 DTNBO60941 627 aa25.54■■□□□ 1.68
CHMP2A-204ENST00000597848 GNRH1P01148 92 aa25.54■■□□□ 1.68
CHMP2A-204ENST00000597848 PTPREP23469 700 aa25.54■■□□□ 1.68
CHMP2A-204ENST00000597848 ANKRD35Q8N283 1001 aa25.54■■□□□ 1.68
CHMP2A-204ENST00000597848 SLC15A5A6NIM6 579 aa25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 CTDNEP1O95476 244 aa25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 NSMFQ6X4W1 530 aa25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 GPKOWQ92917 476 aaPredicted RBP eCLIP25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 DDX11Q96FC9 970 aa25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 NUDT12Q9BQG2 462 aa25.53■■□□□ 1.68
CHMP2A-204ENST00000597848 NFIBO00712 420 aa25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 SCG2P13521 617 aa25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 ST3GAL1Q11201 340 aa25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 PFKFB3Q16875 520 aaPredicted RBP25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 CLEC4DQ8WXI8 215 aa25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 PRDM10Q9NQV6 1147 aa25.52■■□□□ 1.68
CHMP2A-204ENST00000597848 DEXIO95424 95 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 ADORA2AP29274 412 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 MORN1Q5T089 497 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 WWC2Q6AWC2 1192 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 OTOP1Q7RTM1 612 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 MCF2L2Q86YR7 1114 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 ABRAQ8N0Z2 381 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 SOCS4Q8WXH5 440 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 ORC3Q9UBD5 711 aaPredicted RBP25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 SRRDQ9UH36 339 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 GABRQQ9UN88 632 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 CASP8AP2Q9UKL3 1982 aa25.51■■□□□ 1.67
CHMP2A-204ENST00000597848 PTPDC1A2A3K4 754 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 PCNTO95613 3336 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 PRKCZQ05513 592 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 GRB14Q14449 540 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 PKN1Q16512 942 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 DPP9Q86TI2 863 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 NSUN7Q8NE18 718 aaKnown RBP25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 SNX21Q969T3 373 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 LLPHQ9BRT6 129 aaKnown RBP25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 A1CFQ9NQ94 594 aaKnown RBP25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 GJD2Q9UKL4 321 aa25.5■■□□□ 1.67
CHMP2A-204ENST00000597848 hCG_1984214I3L0E3 225 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 JAK2O60674 1132 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 PGK2P07205 417 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 CYP2B6P20813 491 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 FLT3LGP49771 235 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 NAPAP54920 295 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 MAP2K5Q13163 448 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 RNF207Q6ZRF8 634 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 CTU1Q7Z7A3 348 aaKnown RBP25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 HSCBQ8IWL3 235 aa25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 ZNF713Q8N859 430 aaPredicted RBP25.49■■□□□ 1.67
CHMP2A-204ENST00000597848 PFASO15067 1338 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 STK36Q9NRP7 1315 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 CFBP00751 764 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 RGS2P41220 211 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 PRMT2P55345 433 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 BAATQ14032 418 aaPredicted RBP25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 DHX30Q7L2E3 1194 aaKnown RBP eCLIP25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 TBC1D5Q92609 795 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 BARHL2Q9NY43 387 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 SLC5A4Q9NY91 659 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 ZSWIM8A7E2V4 1837 aa25.48■■□□□ 1.67
CHMP2A-204ENST00000597848 K7ELQ4 463 aaPredicted RBP25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 STXBP3O00186 592 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 CALML3P27482 149 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 RGS22Q8NE09 1264 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 RAET1EQ8TD07 263 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 WASF1Q92558 559 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 CYP39A1Q9NYL5 469 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 MYH6P13533 1939 aa25.47■■□□□ 1.67
CHMP2A-204ENST00000597848 SMCHD1A6NHR9 2005 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 POTEB2H3BUK9 544 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 COBLO75128 1261 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 RPS6P62753 249 aaKnown RBP25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 CCDC12Q8WUD4 166 aaPredicted RBP25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 USP6NLQ92738 828 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 CUL5Q93034 780 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 PSTPIP2Q9H939 334 aa25.46■■□□□ 1.67
CHMP2A-204ENST00000597848 MGAMO43451 1857 aa25.45■■□□□ 1.67
CHMP2A-204ENST00000597848 GCOM1H8Y6P7 765 aaPredicted RBP25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 OPLAHO14841 1288 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 POLR2MP0CAP2 368 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 FDPSP14324 419 aaKnown RBP25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 TYW1BQ6NUM6 668 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 PPP1R18Q6NYC8 613 aa25.45■■□□□ 1.66
CHMP2A-204ENST00000597848 SLC30A10Q6XR72 485 aa25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms