RNA–Protein interactions for RNA: ENST00000597651.5

SOX2-OT-227, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 629 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-227ENST00000597651 B4E1Z4 1266 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 POTEB2H3BUK9 544 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 PLA2G6O60733 806 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 KDM4AO75164 1064 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 CASC1Q6TDU7 716 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 KIAA1211Q6ZU35 1233 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 CCDC144CPQ8IYA2 1237 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 ANKRD35Q8N283 1001 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 ANO2Q9NQ90 1003 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 PRDM5Q9NQX1 630 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 RNF146Q9NTX7 359 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 ZHX1Q9UKY1 873 aaPredicted RBP16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 CNPY2Q9Y2B0 182 aa16.03■□□□□ 0.16
SOX2-OT-227ENST00000597651 ACLYP53396 1101 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 KCNA10Q16322 511 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 CCDC144BQ3MJ40 725 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 STOX1Q6ZVD7 989 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 RNF180Q86T96 592 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 FAM160B2Q86V87 743 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 TMEM47Q9BQJ4 181 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 ZKSCAN3Q9BRR0 538 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 FBXO40Q9UH90 709 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 FAM184BQ9ULE4 1060 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 MTMR7Q9Y216 660 aa16.02■□□□□ 0.16
SOX2-OT-227ENST00000597651 DUSP11O75319 330 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 SLC16A2P36021 539 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 NT5C2P49902 561 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 FAAP100Q0VG06 881 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 CCDC174Q6PII3 467 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 CHURC1Q8WUH1 139 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 TRERF1Q96PN7 1200 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 LBHD1Q9BQE6 289 aaPredicted RBP16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 KRT23Q9C075 422 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 UPF3AQ9H1J1 476 aaKnown RBP16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 ACAD9Q9H845 621 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 CNNM2Q9H8M5 875 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 ZSWIM5Q9P217 1185 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 PRUNE2Q8WUY3 3088 aa16.01■□□□□ 0.15
SOX2-OT-227ENST00000597651 E7EWF7 191 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 FDX1P10109 184 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 ALAS1P13196 640 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 CST5P28325 142 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-227ENST00000597651 GJA9P57773 515 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 BTNL9Q6UXG8 535 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 GUCD1Q96NT3 240 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 TSEN34Q9BSV6 310 aaKnown RBP16■□□□□ 0.15
SOX2-OT-227ENST00000597651 RANBP17Q9H2T7 1088 aaKnown RBP16■□□□□ 0.15
SOX2-OT-227ENST00000597651 ABHD16BQ9H3Z7 469 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 PDGFCQ9NRA1 345 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 CYP39A1Q9NYL5 469 aa16■□□□□ 0.15
SOX2-OT-227ENST00000597651 CTDP1Q9Y5B0 961 aaPredicted RBP16■□□□□ 0.15
SOX2-OT-227ENST00000597651 FRMPD2Q68DX3 1309 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 SLC27A2O14975 620 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 KIAA0355O15063 1070 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 PQBP1O60828 265 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 CLTBP09497 229 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 TOP1P11387 765 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 CDK7P50613 346 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 NKX3-2P78367 333 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 NECTIN1Q15223 517 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 CYB5R4Q7L1T6 521 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 ANKRD33Q7Z3H0 272 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 IQCA1Q86XH1 822 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 ZSCAN10Q96SZ4 725 aaPredicted RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 PRKAG2Q9UGJ0 569 aa15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 ISY1Q9ULR0 285 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 GNEQ9Y223 722 aaKnown RBP15.99■□□□□ 0.15
SOX2-OT-227ENST00000597651 TNKSO95271 1327 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 ASGR1P07306 291 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 SNHG28P0DPA3 235 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 PDHBP11177 359 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 VCANP13611 3396 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 BEX3Q00994 111 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 IKQ13123 557 aaPredicted RBP15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 CREB3L3Q68CJ9 461 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 TAPT1Q6NXT6 567 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 DGKHQ86XP1 1220 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 ENAHQ8N8S7 591 aaPredicted RBP15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 DCAF4Q8WV16 495 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 TTC14Q96N46 770 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 STARD7Q9NQZ5 370 aa15.98■□□□□ 0.15
SOX2-OT-227ENST00000597651 MOXD2PA6NHM9 499 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 NFIBO00712 420 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 ICAM1P05362 532 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 C6orf222P0C671 652 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 TRDNQ13061 729 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 COL9A3Q14050 684 aaPredicted RBP15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 CCDC96Q2M329 555 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 TKFCQ3LXA3 575 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 RALYLQ86SE5 291 aaKnown RBP15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 MORC4Q8TE76 937 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 CLEC4DQ8WXI8 215 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 ANKS1AQ92625 1134 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 TOX2Q96NM4 488 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 CPVLQ9H3G5 476 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 GPCPD1Q9NPB8 672 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 TBX21Q9UL17 535 aa15.97■□□□□ 0.15
SOX2-OT-227ENST00000597651 GRIN2DO15399 1336 aa15.96■□□□□ 0.15
SOX2-OT-227ENST00000597651 SMPD1P17405 629 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms