RNA–Protein interactions for RNA: ENST00000597646.5

COPE-207, Transcript of coatomer protein complex subunit epsilon, humanhuman

TSL 3

Gene COPE, Length 868 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPE-207ENST00000597646 DGKHQ86XP1 1220 aa23.4■■□□□ 1.34
COPE-207ENST00000597646 LAMA4Q16363 1823 aa23.39■■□□□ 1.33
COPE-207ENST00000597646 PQBP1O60828 265 aaKnown RBP23.39■■□□□ 1.33
COPE-207ENST00000597646 GSPT1P15170 499 aaKnown RBP23.39■■□□□ 1.33
COPE-207ENST00000597646 IRX5P78411 483 aaPredicted RBP23.39■■□□□ 1.33
COPE-207ENST00000597646 TNFAIP2Q03169 654 aa23.39■■□□□ 1.33
COPE-207ENST00000597646 RUFY2Q8WXA3 655 aa23.39■■□□□ 1.33
COPE-207ENST00000597646 ZSCAN10Q96SZ4 725 aaPredicted RBP23.39■■□□□ 1.33
COPE-207ENST00000597646 KRT23Q9C075 422 aa23.39■■□□□ 1.33
COPE-207ENST00000597646 DDX49Q9Y6V7 483 aaKnown RBP23.39■■□□□ 1.33
COPE-207ENST00000597646 MYADML2A6NDP7 307 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 MOXD2PA6NHM9 499 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 ADCY6O43306 1168 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 BAATQ14032 418 aaPredicted RBP23.38■■□□□ 1.33
COPE-207ENST00000597646 GNASQ5JWF2 1037 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 C1orf53Q5VUE5 145 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 SH3RF1Q7Z6J0 888 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 PCSK9Q8NBP7 692 aaKnown RBP23.38■■□□□ 1.33
COPE-207ENST00000597646 PNMA1Q8ND90 353 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 KLHDC9Q8NEP7 349 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 PURBQ96QR8 312 aaKnown RBP23.38■■□□□ 1.33
COPE-207ENST00000597646 UBA5Q9GZZ9 404 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 CNNM2Q9H8M5 875 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 PDLIM7Q9NR12 457 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 ZSWIM5Q9P217 1185 aa23.38■■□□□ 1.33
COPE-207ENST00000597646 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.37■■□□□ 1.33
COPE-207ENST00000597646 NFIBO00712 420 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 NT5C2P49902 561 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 GPATCH4Q5T3I0 446 aaKnown RBP23.37■■□□□ 1.33
COPE-207ENST00000597646 BADQ92934 168 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 GLT1D1Q96MS3 346 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 UBAC1Q9BSL1 405 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 IL25Q9H293 177 aa23.37■■□□□ 1.33
COPE-207ENST00000597646 DHX16O60231 1041 aaKnown RBP23.36■■□□□ 1.33
COPE-207ENST00000597646 ASGR1P07306 291 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 CLTBP09497 229 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 SNHG28P0DPA3 235 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 CALML3P27482 149 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 GJA9P57773 515 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 LRIT3Q3SXY7 679 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 USH1GQ495M9 461 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 KATNBL1Q9H079 304 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 CPVLQ9H3G5 476 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 ADD3Q9UEY8 706 aaKnown RBP23.36■■□□□ 1.33
COPE-207ENST00000597646 PNMA2Q9UL42 364 aa23.36■■□□□ 1.33
COPE-207ENST00000597646 TNKSO95271 1327 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 TRIM43BA6NCK2 446 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 DCDC2CA8MYV0 355 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 BEX3Q00994 111 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 FBXO16Q8IX29 292 aaPredicted RBP23.35■■□□□ 1.33
COPE-207ENST00000597646 TRIM43Q96BQ3 446 aaPredicted RBP23.35■■□□□ 1.33
COPE-207ENST00000597646 AP5M1Q9H0R1 490 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 PDGFCQ9NRA1 345 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 TMEM39AQ9NV64 488 aa23.35■■□□□ 1.33
COPE-207ENST00000597646 RANBP2P49792 3224 aaKnown RBP23.35■■□□□ 1.33
COPE-207ENST00000597646 CST5P28325 142 aaPredicted RBP23.34■■□□□ 1.33
COPE-207ENST00000597646 TRDNQ13061 729 aa23.34■■□□□ 1.33
COPE-207ENST00000597646 CCSAPQ6IQ19 270 aaPredicted RBP23.34■■□□□ 1.33
COPE-207ENST00000597646 RNF207Q6ZRF8 634 aa23.34■■□□□ 1.33
COPE-207ENST00000597646 KIAA1211Q6ZU35 1233 aa23.34■■□□□ 1.33
COPE-207ENST00000597646 ENAHQ8N8S7 591 aaPredicted RBP23.34■■□□□ 1.33
COPE-207ENST00000597646 UPF3AQ9H1J1 476 aaKnown RBP23.34■■□□□ 1.33
COPE-207ENST00000597646 ASTN1O14525 1302 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 RAD50Q92878 1312 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 DYNC1LI2O43237 492 aaPredicted RBP23.33■■□□□ 1.33
COPE-207ENST00000597646 RAG1P15918 1043 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 CHMLP26374 656 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 ALDH5A1P51649 535 aaPredicted RBP23.33■■□□□ 1.33
COPE-207ENST00000597646 IFIT1BQ5T764 474 aaKnown RBP23.33■■□□□ 1.33
COPE-207ENST00000597646 SLC30A10Q6XR72 485 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 TLK2Q86UE8 772 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 VAT1LQ9HCJ6 419 aa23.33■■□□□ 1.33
COPE-207ENST00000597646 LTBP2Q14767 1821 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 PARP1P09874 1014 aaKnown RBP23.32■■□□□ 1.32
COPE-207ENST00000597646 SMPD1P17405 629 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 IQSEC1Q6DN90 963 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 DEFB123Q8N688 67 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 CLEC4DQ8WXI8 215 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 ANKS1AQ92625 1134 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 VTA1Q9NP79 307 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 DNAH12Q6ZR08 3092 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 ELP1O95163 1332 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 WDR19Q8NEZ3 1342 aa23.32■■□□□ 1.32
COPE-207ENST00000597646 PTH1RQ03431 593 aa23.31■■□□□ 1.32
COPE-207ENST00000597646 CDC37Q16543 378 aaPredicted RBP23.31■■□□□ 1.32
COPE-207ENST00000597646 ASPRV1Q53RT3 343 aa23.31■■□□□ 1.32
COPE-207ENST00000597646 TAPT1Q6NXT6 567 aa23.31■■□□□ 1.32
COPE-207ENST00000597646 ADGRF4Q8IZF3 695 aa23.31■■□□□ 1.32
COPE-207ENST00000597646 MPHOSPH6Q99547 160 aaKnown RBP23.31■■□□□ 1.32
COPE-207ENST00000597646 U3KPZ7 1027 aaPredicted RBP23.31■■□□□ 1.32
COPE-207ENST00000597646 LCTP09848 1927 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 A0A0U1RQG5 324 aaPredicted RBP23.3■■□□□ 1.32
COPE-207ENST00000597646 ZEB2O60315 1214 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 PTGS1P23219 599 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 RPS6P62753 249 aaKnown RBP23.3■■□□□ 1.32
COPE-207ENST00000597646 PDE4DQ08499 809 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 FAAP100Q0VG06 881 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 SHHQ15465 462 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 Q7L0L9 218 aa23.3■■□□□ 1.32
COPE-207ENST00000597646 ANKRD33Q7Z3H0 272 aa23.3■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms