RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 PSMC4P43686 418 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 GPR142Q7Z601 462 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 TRIM22Q8IYM9 498 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 CHST13Q8NET6 341 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 LLPHQ9BRT6 129 aaKnown RBP26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 RNF146Q9NTX7 359 aa26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 RBM27Q9P2N5 1060 aaKnown RBP26.06■■□□□ 1.76
SNRNP70-204ENST00000595231 K7ELQ4 463 aaPredicted RBP26.05■■□□□ 1.76
SNRNP70-204ENST00000595231 CTCFP49711 727 aaPredicted RBP26.05■■□□□ 1.76
SNRNP70-204ENST00000595231 CCAR1Q8IX12 1150 aaKnown RBP26.05■■□□□ 1.76
SNRNP70-204ENST00000595231 SMARCC2Q8TAQ2 1214 aa26.05■■□□□ 1.76
SNRNP70-204ENST00000595231 ABCB11O95342 1321 aa26.05■■□□□ 1.76
SNRNP70-204ENST00000595231 PTPDC1A2A3K4 754 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 OPLAHO14841 1288 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 SCG2P13521 617 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 LBX1P52954 281 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 AKAP17AQ02040 695 aaKnown RBP26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 CUL4AQ13619 759 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 WWC2Q6AWC2 1192 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.04■■□□□ 1.762e-7■□□□□ 9.6
SNRNP70-204ENST00000595231 GPKOWQ92917 476 aaPredicted RBP eCLIP26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 CASP8AP2Q9UKL3 1982 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 STK36Q9NRP7 1315 aa26.04■■□□□ 1.76
SNRNP70-204ENST00000595231 NFIBO00712 420 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 DEXIO95424 95 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 FCGRTP55899 365 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 TRAF1Q13077 416 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 KIF22Q14807 665 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 WDR78Q5VTH9 848 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 TYW1BQ6NUM6 668 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 HEATR3Q7Z4Q2 680 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 PLEKHH3Q7Z736 793 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 ERO1AQ96HE7 468 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 ACAD9Q9H845 621 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 FBXO40Q9UH90 709 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 BARHL2Q9NY43 387 aa26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 MRPL11Q9Y3B7 192 aaKnown RBP26.03■■□□□ 1.76
SNRNP70-204ENST00000595231 TNPO2O14787 897 aaKnown RBP26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 STRNO43815 780 aa26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 PTPREP23469 700 aa26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 SHISA4Q96DD7 197 aa26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 DDX11Q96FC9 970 aa26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 AIFM3Q96NN9 605 aa26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 ORC3Q9UBD5 711 aaPredicted RBP26.02■■□□□ 1.76
SNRNP70-204ENST00000595231 STXBP3O00186 592 aa26.01■■□□□ 1.75
SNRNP70-204ENST00000595231 TBC1D5Q92609 795 aa26.01■■□□□ 1.75
SNRNP70-204ENST00000595231 ZNFX1Q9P2E3 1918 aaKnown RBP26.01■■□□□ 1.75
SNRNP70-204ENST00000595231 GJD2Q9UKL4 321 aa26.01■■□□□ 1.75
SNRNP70-204ENST00000595231 PLXNB2O15031 1838 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 hCG_1984214I3L0E3 225 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 FCER1AP12319 257 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 GRB14Q14449 540 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 MORN1Q5T089 497 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 HSCBQ8IWL3 235 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 ABRAQ8N0Z2 381 aa26■■□□□ 1.75
SNRNP70-204ENST00000595231 ZNF713Q8N859 430 aaPredicted RBP26■■□□□ 1.75
SNRNP70-204ENST00000595231 A1CFQ9NQ94 594 aaKnown RBP26■■□□□ 1.75
SNRNP70-204ENST00000595231 RGS22Q8NE09 1264 aa25.99■■□□□ 1.75
SNRNP70-204ENST00000595231 IVNS1ABPQ9Y6Y0 642 aa25.99■■□□□ 1.75
SNRNP70-204ENST00000595231 MMP19Q99542 508 aa25.99■■□□□ 1.75
SNRNP70-204ENST00000595231 CWC22Q9HCG8 908 aaKnown RBP25.99■■□□□ 1.75
SNRNP70-204ENST00000595231 SLC15A5A6NIM6 579 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 ADORA2AP29274 412 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 GHRHRQ02643 423 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 KCTD2Q14681 263 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 ANKRD35Q8N283 1001 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 USP6NLQ92738 828 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 CYP39A1Q9NYL5 469 aa25.98■■□□□ 1.75
SNRNP70-204ENST00000595231 GNRH1P01148 92 aa25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 NAPAP54920 295 aa25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 HMGN5P82970 282 aaKnown RBP25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 NSMFQ6X4W1 530 aa25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 VPS54Q9P1Q0 977 aa25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 GABRQQ9UN88 632 aa25.97■■□□□ 1.75
SNRNP70-204ENST00000595231 DNAJC25-GNG10A0A024R161 153 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 COBLO75128 1261 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 BAATQ14032 418 aaPredicted RBP25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 PPP1R18Q6NYC8 613 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 MCF2L2Q86YR7 1114 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 MAF1Q9H063 256 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 SH3GLB2Q9NR46 395 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 HTTP42858 3142 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 ZNF236Q9UL36 1845 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 PGK2P07205 417 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 RPS6P62753 249 aaKnown RBP25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 PRKCZQ05513 592 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 RNF207Q6ZRF8 634 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 OTOP1Q7RTM1 612 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 WASF1Q92558 559 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 NUDT12Q9BQG2 462 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 ALG1Q9BT22 464 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 GJB4Q9NTQ9 266 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 SRRDQ9UH36 339 aa25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 ZSCAN21Q9Y5A6 473 aaPredicted RBP25.96■■□□□ 1.75
SNRNP70-204ENST00000595231 PFASO15067 1338 aa25.95■■□□□ 1.74
SNRNP70-204ENST00000595231 CFBP00751 764 aa25.95■■□□□ 1.74
SNRNP70-204ENST00000595231 HSD17B4P51659 736 aa25.95■■□□□ 1.74
SNRNP70-204ENST00000595231 ARHGEF6Q15052 776 aa25.95■■□□□ 1.74
SNRNP70-204ENST00000595231 SLC30A10Q6XR72 485 aa25.95■■□□□ 1.74
SNRNP70-204ENST00000595231 INTS4Q96HW7 963 aaKnown RBP25.95■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms