RNA–Protein interactions for RNA: ENST00000593912.5

VRK3-204, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 551 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-204ENST00000593912 CACNA2D2Q9NY47 1150 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 NRBP1Q9UHY1 535 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 CDH22Q9UJ99 828 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 FAM184BQ9ULE4 1060 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 SORCS3Q9UPU3 1222 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 CHMP3Q9Y3E7 222 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ITPR3Q14573 2671 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 CACNA1IQ9P0X4 2223 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 ASTN1O14525 1302 aa3.91□□□□□ -1.78
VRK3-204ENST00000593912 C19orf81C9J6K1 198 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 E9PSI1 815 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 GRM6O15303 877 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 ARHGAP6O43182 974 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 NCK2O43639 380 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 STRNO43815 780 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 TBC1D12O60347 775 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 GDF9O60383 454 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 KINO60870 393 aaKnown RBP3.9□□□□□ -1.79
VRK3-204ENST00000593912 GLP2RO95838 553 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 IQCF3P0C7M6 154 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 PLA2G2AP14555 144 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 VCAM1P19320 739 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 GJA9P57773 515 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 UBE4AQ14139 1066 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 PLS1Q14651 629 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 GPNMBQ14956 572 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 SPECC1Q5M775 1068 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 TMEM63BQ5T3F8 832 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 USP17L2Q6R6M4 530 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 LBX2Q6XYB7 198 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.9□□□□□ -1.79
VRK3-204ENST00000593912 CATSPERGQ6ZRH7 1159 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 TMEM192Q8IY95 271 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 UBALD2Q8IYN6 164 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.9□□□□□ -1.79
VRK3-204ENST00000593912 APOL5Q9BWW9 433 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 PUS3Q9BZE2 481 aaKnown RBP3.9□□□□□ -1.79
VRK3-204ENST00000593912 SPATC1LQ9H0A9 340 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 UPF3AQ9H1J1 476 aaKnown RBP3.9□□□□□ -1.79
VRK3-204ENST00000593912 ALDH8A1Q9H2A2 487 aaPredicted RBP3.9□□□□□ -1.79
VRK3-204ENST00000593912 TSHZ2Q9NRE2 1034 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 CNNM1Q9NRU3 951 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 SLC5A4Q9NY91 659 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 TIMELESSQ9UNS1 1208 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 CNPY2Q9Y2B0 182 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 MAP3K2Q9Y2U5 619 aa3.9□□□□□ -1.79
VRK3-204ENST00000593912 UBR5O95071 2799 aaPredicted RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 NEURL1BA8MQ27 555 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 C2CD4DB7Z1M9 353 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 H7C1W4 665 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 PYCARD-AS1I3L0S3 204 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 C1QL1O75973 258 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SNAI1O95863 264 aaPredicted RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 RFC2P35250 354 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 CASP7P55210 303 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SRSF1Q07955 248 aaKnown RBP eCLIP3.89□□□□□ -1.79
VRK3-204ENST00000593912 SPEM2Q0P670 501 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 COASYQ13057 564 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 IFIT5Q13325 482 aaKnown RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 COL28A1Q2UY09 1125 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 ZNF792Q3KQV3 632 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 CCDC144BQ3MJ40 725 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 LDHAL6AQ6ZMR3 332 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 RBM23Q86U06 439 aaKnown RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 FBXO11Q86XK2 927 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 TMEFF1Q8IYR6 380 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 GPR161Q8N6U8 529 aaKnown RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 NETO1Q8TDF5 533 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SUSD6Q92537 303 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 GATA6Q92908 595 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 FAM163AQ96GL9 167 aaPredicted RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 RTP3Q9BQQ7 232 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 PLA2G12BQ9BX93 195 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 RPAP3Q9H6T3 665 aaPredicted RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 SPC25Q9HBM1 224 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 ERVK-5Q9HDB9 667 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SMG5Q9UPR3 1016 aaKnown RBP3.89□□□□□ -1.79
VRK3-204ENST00000593912 SUGT1Q9Y2Z0 365 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 MROH5Q6ZUA9 1318 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SALL1Q9NSC2 1324 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 SPTA1P02549 2419 aa3.89□□□□□ -1.79
VRK3-204ENST00000593912 RALGAPA1Q6GYQ0 2036 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 PARP14Q460N5 1801 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 FBN2P35556 2912 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 NBPF19A0A087WUL8 3843 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 STK25O00506 426 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 LGR5O75473 907 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 DCNP07585 359 aaKnown RBP3.88□□□□□ -1.79
VRK3-204ENST00000593912 ASNSP08243 561 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 FCER1AP12319 257 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 HOXD8P13378 290 aaPredicted RBP3.88□□□□□ -1.79
VRK3-204ENST00000593912 ATF7P17544 494 aaPredicted RBP3.88□□□□□ -1.79
VRK3-204ENST00000593912 CTNNB1P35222 781 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 ZEB1P37275 1124 aaPredicted RBP3.88□□□□□ -1.79
VRK3-204ENST00000593912 BTDP43251 543 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 FOXC1Q12948 553 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 CAMK1Q14012 370 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 GCKRQ14397 625 aa3.88□□□□□ -1.79
VRK3-204ENST00000593912 LPAL2Q16609 132 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms