RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 MYH6P13533 1939 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 PNMA6FA0A0J9YX94 578 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 CYP2B6P20813 491 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 CDC27P30260 824 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 MUM1L1Q5H9M0 696 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.31■□□□□ 0.36
DDX39A-221ENST00000593026 USP6NLQ92738 828 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 DDX11Q96FC9 970 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 ZNF274Q96GC6 653 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-221ENST00000593026 APBA2Q99767 749 aa17.31■□□□□ 0.36
DDX39A-221ENST00000593026 FAM217BQ9NTX9 383 aaPredicted RBP17.31■□□□□ 0.36
DDX39A-221ENST00000593026 SEC63Q9UGP8 760 aaKnown RBP17.31■□□□□ 0.36
DDX39A-221ENST00000593026 ABCB11O95342 1321 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 ADCY3O60266 1144 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 XRCC5P13010 732 aaKnown RBP17.3■□□□□ 0.36
DDX39A-221ENST00000593026 ADD1P35611 737 aaKnown RBP17.3■□□□□ 0.36
DDX39A-221ENST00000593026 CCT2P78371 535 aaKnown RBP17.3■□□□□ 0.36
DDX39A-221ENST00000593026 TRAF1Q13077 416 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
DDX39A-221ENST00000593026 DPP9Q86TI2 863 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 ANKRD35Q8N283 1001 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 SLC5A4Q9NY91 659 aa17.3■□□□□ 0.36
DDX39A-221ENST00000593026 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
DDX39A-221ENST00000593026 CNTNAP5Q8WYK1 1306 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 CCDC85CA6NKD9 419 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 NFIBO00712 420 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 PPP1R11O60927 126 aaPredicted RBP17.29■□□□□ 0.36
DDX39A-221ENST00000593026 PGK2P07205 417 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 HOXC6P09630 235 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 GRK4P32298 578 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 STK3Q13188 491 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 RABEP1Q15276 862 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 SLC9C1Q4G0N8 1177 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 NSMFQ6X4W1 530 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 SLAIN1Q8ND83 568 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 PXYLP1Q8TE99 480 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 NCOA5Q9HCD5 579 aaKnown RBP17.29■□□□□ 0.36
DDX39A-221ENST00000593026 A1CFQ9NQ94 594 aaKnown RBP17.29■□□□□ 0.36
DDX39A-221ENST00000593026 TPCN1Q9ULQ1 816 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 PCDHA1Q9Y5I3 950 aa17.29■□□□□ 0.36
DDX39A-221ENST00000593026 SMCHD1A6NHR9 2005 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 PFASO15067 1338 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 COBLO75128 1261 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 ELNP15502 786 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 FUT2Q10981 343 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 TRMT44Q8IYL2 757 aaKnown RBP17.28■□□□□ 0.36
DDX39A-221ENST00000593026 CLEC4DQ8WXI8 215 aa17.28■□□□□ 0.36
DDX39A-221ENST00000593026 SLKQ9H2G2 1235 aaPredicted RBP17.28■□□□□ 0.36
DDX39A-221ENST00000593026 MRPL11Q9Y3B7 192 aaKnown RBP17.28■□□□□ 0.36
DDX39A-221ENST00000593026 hCG_1642624A0A1W2PR95 340 aa17.27■□□□□ 0.36
DDX39A-221ENST00000593026 CPLX1O14810 134 aa17.27■□□□□ 0.36
DDX39A-221ENST00000593026 NPLOC4Q8TAT6 608 aa17.27■□□□□ 0.36
DDX39A-221ENST00000593026 SH3TC2Q8TF17 1288 aa17.27■□□□□ 0.36
DDX39A-221ENST00000593026 CYP39A1Q9NYL5 469 aa17.27■□□□□ 0.36
DDX39A-221ENST00000593026 BIN2Q9UBW5 565 aaPredicted RBP17.27■□□□□ 0.36
DDX39A-221ENST00000593026 ZNFX1Q9P2E3 1918 aaKnown RBP17.27■□□□□ 0.35
DDX39A-221ENST00000593026 RBBP6Q7Z6E9 1792 aaKnown RBP17.26■□□□□ 0.35
DDX39A-221ENST00000593026 DNAJC25-GNG10A0A024R161 153 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 PTPDC1A2A3K4 754 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 POTEB2H3BUK9 544 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 HMGCRP04035 888 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 CCL14Q16627 93 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 ZNF792Q3KQV3 632 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 CPLX2Q6PUV4 134 aaKnown RBP17.26■□□□□ 0.35
DDX39A-221ENST00000593026 MCF2L2Q86YR7 1114 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 TRIB2Q92519 343 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 DIS3Q9Y2L1 958 aaKnown RBP17.26■□□□□ 0.35
DDX39A-221ENST00000593026 V9GY48 417 aaPredicted RBP17.26■□□□□ 0.35
DDX39A-221ENST00000593026 PLXNA1Q9UIW2 1896 aa17.26■□□□□ 0.35
DDX39A-221ENST00000593026 ST18O60284 1047 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 PFKFB2O60825 505 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 IFNAR1P17181 557 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 SCRN1Q12765 414 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 BAATQ14032 418 aaPredicted RBP17.25■□□□□ 0.35
DDX39A-221ENST00000593026 NTRK3Q16288 839 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 SLC30A10Q6XR72 485 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 RNF207Q6ZRF8 634 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 RGS22Q8NE09 1264 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 IL27Q8NEV9 243 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 MAML3Q96JK9 1138 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 MAF1Q9H063 256 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 FLRT1Q9NZU1 646 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 RBM27Q9P2N5 1060 aaKnown RBP17.25■□□□□ 0.35
DDX39A-221ENST00000593026 LIMCH1Q9UPQ0 1083 aa17.25■□□□□ 0.35
DDX39A-221ENST00000593026 LARGE1O95461 756 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 INHAP05111 366 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 CALML3P27482 149 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 AKAP17AQ02040 695 aaKnown RBP17.24■□□□□ 0.35
DDX39A-221ENST00000593026 CNTN2Q02246 1040 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 ME3Q16798 604 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 OLFML2BQ68BL8 750 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 HEATR3Q7Z4Q2 680 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 FAM133AQ8N9E0 248 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 PHKBQ93100 1093 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 ARMC5Q96C12 935 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 RNF26Q9BY78 433 aaPredicted RBP17.24■□□□□ 0.35
DDX39A-221ENST00000593026 HTTP42858 3142 aa17.24■□□□□ 0.35
DDX39A-221ENST00000593026 OPLAHO14841 1288 aa17.23■□□□□ 0.35
DDX39A-221ENST00000593026 PRPF3O43395 683 aaKnown RBP17.23■□□□□ 0.35
DDX39A-221ENST00000593026 PPFIA3O75145 1194 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms