RNA–Protein interactions for RNA: ENST00000592643.5

H3F3B-212, Transcript of H3 histone family member 3B, humanhuman

TSL 3 BASIC

Gene H3F3B, Length 795 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3B-212ENST00000592643 NUP133Q8WUM0 1156 aa13.82□□□□□ -0.2
H3F3B-212ENST00000592643 TBC1D5Q92609 795 aa13.82□□□□□ -0.2
H3F3B-212ENST00000592643 VAT1LQ9HCJ6 419 aa13.82□□□□□ -0.2
H3F3B-212ENST00000592643 CASTP20810 708 aaKnown RBP13.81□□□□□ -0.2
H3F3B-212ENST00000592643 RGS19P49795 217 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 KCTD2Q14681 263 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 TKFCQ3LXA3 575 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 OLFML2BQ68BL8 750 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 Q6ZUG5 572 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 DPP9Q86TI2 863 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 CCDC144CPQ8IYA2 1237 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 PIGSQ96S52 555 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 UPF3BQ9BZI7 483 aaKnown RBP13.81□□□□□ -0.2
H3F3B-212ENST00000592643 ACAD9Q9H845 621 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 CWC22Q9HCG8 908 aaKnown RBP13.81□□□□□ -0.2
H3F3B-212ENST00000592643 CYP39A1Q9NYL5 469 aa13.81□□□□□ -0.2
H3F3B-212ENST00000592643 SNAI1O95863 264 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-212ENST00000592643 HMGB1P09429 215 aaKnown RBP13.8□□□□□ -0.2
H3F3B-212ENST00000592643 CYBAP13498 195 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 CDC27P30260 824 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 MNX1P50219 401 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-212ENST00000592643 EVCP57679 992 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 APOBRQ0VD83 1088 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 USH1GQ495M9 461 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 PRAMEF19Q5SWL8 479 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 LHX8Q68G74 356 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 BLOC1S2Q6QNY1 142 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 SLC30A10Q6XR72 485 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 TMTC3Q6ZXV5 915 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 RUFY3Q7L099 469 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 UBE2Q1Q7Z7E8 422 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 MICU3Q86XE3 530 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 TMTC2Q8N394 836 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 FANCBQ8NB91 859 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 BRF1Q92994 677 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 TM6SF1Q9BZW5 370 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 KATNBL1Q9H079 304 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 RNF208Q9H0X6 261 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 BIN2Q9UBW5 565 aaPredicted RBP13.8□□□□□ -0.2
H3F3B-212ENST00000592643 FBXO40Q9UH90 709 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 DIS3Q9Y2L1 958 aaKnown RBP13.8□□□□□ -0.2
H3F3B-212ENST00000592643 SLC12A7Q9Y666 1083 aa13.8□□□□□ -0.2
H3F3B-212ENST00000592643 CCDC69A6NI79 296 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 GJB1P08034 283 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 BAATQ14032 418 aaPredicted RBP13.79□□□□□ -0.2
H3F3B-212ENST00000592643 MAMDC4Q6UXC1 1216 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 NFXL1Q6ZNB6 911 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 TRMT44Q8IYL2 757 aaKnown RBP13.79□□□□□ -0.2
H3F3B-212ENST00000592643 ANKRD35Q8N283 1001 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 KIF2CQ99661 725 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 SPZ1Q9BXG8 430 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 CRISPLD2Q9H0B8 497 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.79□□□□□ -0.26e-12■■■□□ 15.4
H3F3B-212ENST00000592643 COL20A1Q9P218 1284 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 CTDP1Q9Y5B0 961 aaPredicted RBP13.79□□□□□ -0.2
H3F3B-212ENST00000592643 RPTORQ8N122 1335 aa13.79□□□□□ -0.2
H3F3B-212ENST00000592643 LCTP09848 1927 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 KLF18A0A0U1RQI7 1052 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 hCG_1642624A0A1W2PR95 340 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 ZBTB5O15062 677 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 ZNF865P0CJ78 1059 aaPredicted RBP13.78□□□□□ -0.2
H3F3B-212ENST00000592643 GJA8P48165 433 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 UBXN2AP68543 259 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 FBXO11Q86XK2 927 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 HOMER1Q86YM7 354 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 U2AF1L4Q8WU68 220 aaKnown RBP13.78□□□□□ -0.2
H3F3B-212ENST00000592643 DDX11Q96FC9 970 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 DEFB118Q96PH6 123 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 LARP6Q9BRS8 491 aaKnown RBP13.78□□□□□ -0.2
H3F3B-212ENST00000592643 TINF2Q9BSI4 451 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 NID2Q14112 1375 aa13.78□□□□□ -0.2
H3F3B-212ENST00000592643 ADCY6O43306 1168 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 SGPL1O95470 568 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 PSMA5P28066 241 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 SMARCA1P28370 1054 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 ADD1P35611 737 aaKnown RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 ANAPC15P60006 121 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 RPS6P62753 249 aaKnown RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 GHRHRQ02643 423 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 NSMFQ6X4W1 530 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 ZNF467Q7Z7K2 595 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 RGS22Q8NE09 1264 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 CTCFLQ8NI51 663 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 PIBF1Q8WXW3 757 aa13.77□□□□□ -0.21
H3F3B-212ENST00000592643 HMX1Q9NP08 348 aaPredicted RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 BAZ2BQ9UIF8 2168 aaKnown RBP13.77□□□□□ -0.21
H3F3B-212ENST00000592643 RBBP6Q7Z6E9 1792 aaKnown RBP13.76□□□□□ -0.21
H3F3B-212ENST00000592643 PFASO15067 1338 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 ABCB11O95342 1321 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 CNTNAP5Q8WYK1 1306 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 PNMA6FA0A0J9YX94 578 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 POTEB2H3BUK9 544 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 ZBTB43O43298 467 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 DHX16O60231 1041 aaKnown RBP13.76□□□□□ -0.21
H3F3B-212ENST00000592643 CALM1P0DP23 149 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 CALM2P0DP24 149 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 CALM3P0DP25 149 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 PTGS1P23219 599 aa13.76□□□□□ -0.21
H3F3B-212ENST00000592643 PDIA3P30101 505 aaKnown RBP13.76□□□□□ -0.21
H3F3B-212ENST00000592643 NTRK3Q16288 839 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms