RNA–Protein interactions for RNA: ENST00000592578.5

PSME3-215, Transcript of proteasome activator subunit 3, humanhuman

TSL 4

Gene PSME3, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-215ENST00000592578 MTMR4Q9NYA4 1195 aa16.91■□□□□ 0.3
PSME3-215ENST00000592578 SYNPO2Q9UMS6 1093 aa16.91■□□□□ 0.3
PSME3-215ENST00000592578 YBX2Q9Y2T7 364 aaKnown RBP16.91■□□□□ 0.3
PSME3-215ENST00000592578 PARP14Q460N5 1801 aa16.91■□□□□ 0.3
PSME3-215ENST00000592578 GPR37L1O60883 481 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 SNAI1O95863 264 aaPredicted RBP16.9■□□□□ 0.3
PSME3-215ENST00000592578 TTLL1O95922 423 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 KCNQ1P51787 676 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 NEDD1Q8NHV4 660 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 MKL1Q969V6 931 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 CEP95Q96GE4 821 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 UPF3AQ9H1J1 476 aaKnown RBP16.9■□□□□ 0.3
PSME3-215ENST00000592578 EPHX3Q9H6B9 360 aa16.9■□□□□ 0.3
PSME3-215ENST00000592578 ZNF214Q9UL59 606 aaPredicted RBP16.9■□□□□ 0.3
PSME3-215ENST00000592578 BDP1A6H8Y1 2624 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 TRIM6-TRIM34B2RNG4 842 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 NDUFB10O96000 172 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 CD4P01730 458 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 PFKMP08237 780 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 POU3F3P20264 500 aaPredicted RBP16.89■□□□□ 0.29
PSME3-215ENST00000592578 TFAP4Q01664 338 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 CCDC144BQ3MJ40 725 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 TMEM67Q5HYA8 995 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 PPP4R3BQ5MIZ7 849 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 SNRNP48Q6IEG0 339 aaKnown RBP16.89■□□□□ 0.29
PSME3-215ENST00000592578 NOL8Q76FK4 1167 aaKnown RBP16.89■□□□□ 0.29
PSME3-215ENST00000592578 CHD1LQ86WJ1 897 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 SLF1Q9BQI6 1058 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.89■□□□□ 0.29
PSME3-215ENST00000592578 FBXO40Q9UH90 709 aa16.89■□□□□ 0.29
PSME3-215ENST00000592578 MYADML2A6NDP7 307 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 FOXP2O15409 715 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 IGHDP01880 384 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 ATP2A2P16615 1042 aaKnown RBP16.88■□□□□ 0.29
PSME3-215ENST00000592578 RABGGTBP53611 331 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 MCMDC2Q4G0Z9 681 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 ANKRD35Q8N283 1001 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 PRPF38AQ8NAV1 312 aaKnown RBP16.88■□□□□ 0.29
PSME3-215ENST00000592578 HLA-CQ95604 372 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 RILPL2Q969X0 211 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 NUP88Q99567 741 aaPredicted RBP16.88■□□□□ 0.29
PSME3-215ENST00000592578 PLIN4Q96Q06 1357 aa16.88■□□□□ 0.29
PSME3-215ENST00000592578 KIF28PB7ZC32 967 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 ZBED4O75132 1171 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 ACTN1P12814 892 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 SLC4A3P48751 1232 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 NUCB1Q02818 461 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 ALX1Q15699 326 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 VPS53Q5VIR6 699 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 GMCL1P1Q8NEA9 526 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 REPS2Q8NFH8 660 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 FAM227BQ96M60 508 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 ANAPC4Q9UJX5 808 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 SUPT16HQ9Y5B9 1047 aaKnown RBP16.87■□□□□ 0.29
PSME3-215ENST00000592578 MTCH2Q9Y6C9 303 aa16.87■□□□□ 0.29
PSME3-215ENST00000592578 GREB1LQ9C091 1923 aaPredicted RBP16.87■□□□□ 0.29
PSME3-215ENST00000592578 DNAJC25-GNG10A0A024R161 153 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 A0A0D9SFI3 127 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 TSPY2A6NKD2 308 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 CCL23P55773 120 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 CTDSPL2Q05D32 466 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 ITGA7Q13683 1181 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 LRRC47Q8N1G4 583 aaKnown RBP16.86■□□□□ 0.29
PSME3-215ENST00000592578 AP5M1Q9H0R1 490 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 OSBPL3Q9H4L5 887 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 FEM1BQ9UK73 627 aa16.86■□□□□ 0.29
PSME3-215ENST00000592578 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.86■□□□□ 0.29
PSME3-215ENST00000592578 SUPT20HL2P0C7V6 817 aa16.85■□□□□ 0.29
PSME3-215ENST00000592578 TNFAIP2Q03169 654 aa16.85■□□□□ 0.29
PSME3-215ENST00000592578 SLFN13Q68D06 897 aa16.85■□□□□ 0.29
PSME3-215ENST00000592578 ARMCX2Q7L311 632 aa16.85■□□□□ 0.29
PSME3-215ENST00000592578 ALYREFQ86V81 257 aaKnown RBP16.85■□□□□ 0.29
PSME3-215ENST00000592578 PLEKHM2Q8IWE5 1019 aa16.85■□□□□ 0.29
PSME3-215ENST00000592578 TLL1O43897 1013 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 FGAP02671 866 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 BMP3P12645 472 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 MFAP1P55081 439 aaKnown RBP16.84■□□□□ 0.29
PSME3-215ENST00000592578 NKX3-2P78367 333 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 NMIQ13287 307 aaPredicted RBP16.84■□□□□ 0.29
PSME3-215ENST00000592578 CPXCR1Q8N123 301 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 SLC43A3Q8NBI5 491 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 CHST13Q8NET6 341 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 KIFC2Q96AC6 838 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 SLC9A7Q96T83 725 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 NOC4LQ9BVI4 516 aaKnown RBP16.84■□□□□ 0.29
PSME3-215ENST00000592578 STX8Q9UNK0 236 aa16.84■□□□□ 0.29
PSME3-215ENST00000592578 LRRC37A2A6NM11 1700 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 ATP2A1O14983 1001 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 ORC4O43929 436 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 RANBP6O60518 1105 aaKnown RBP16.83■□□□□ 0.28
PSME3-215ENST00000592578 CA3P07451 260 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 FDX1P10109 184 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 HSPD1P10809 573 aaKnown RBP16.83■□□□□ 0.28
PSME3-215ENST00000592578 MYOGP15173 224 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 SDSP20132 328 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 CCDC171Q6TFL3 1326 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 CXCL17Q6UXB2 119 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 PHOSPHO2Q8TCD6 241 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 INCENPQ9NQS7 918 aa16.83■□□□□ 0.28
PSME3-215ENST00000592578 TOMM22Q9NS69 142 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms