RNA–Protein interactions for RNA: ENST00000592391.5

DDX39A-217, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,080 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-217ENST00000592391 TMTC2Q8N394 836 aa16.92■□□□□ 0.3
DDX39A-217ENST00000592391 DIS3LQ8TF46 1054 aaKnown RBP16.92■□□□□ 0.3
DDX39A-217ENST00000592391 HTATIP2Q9BUP3 242 aa16.92■□□□□ 0.3
DDX39A-217ENST00000592391 GPHNQ9NQX3 736 aaPredicted RBP16.92■□□□□ 0.3
DDX39A-217ENST00000592391 SOWAHBA6NEL2 793 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 SNAI1O95863 264 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-217ENST00000592391 ZNF865P0CJ78 1059 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-217ENST00000592391 LIFRP42702 1097 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 KRT32Q14532 448 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 QRICH1Q2TAL8 776 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 USH1GQ495M9 461 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 ZNF654Q8IZM8 581 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 NEK1Q96PY6 1258 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 MAP3K14Q99558 947 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 VAT1LQ9HCJ6 419 aa16.91■□□□□ 0.3
DDX39A-217ENST00000592391 CDKN2AIPQ9NXV6 580 aaPredicted RBP16.91■□□□□ 0.3
DDX39A-217ENST00000592391 ASB14A6NK59 587 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 DDAH1O94760 285 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 HSPA4P34932 840 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 BAATQ14032 418 aaPredicted RBP16.9■□□□□ 0.3
DDX39A-217ENST00000592391 ANO1Q5XXA6 986 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 NFXL1Q6ZNB6 911 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 ARMCX2Q7L311 632 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 FBXO11Q86XK2 927 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 CCDC144CPQ8IYA2 1237 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 NUP133Q8WUM0 1156 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 KCNB2Q92953 911 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 MTMR8Q96EF0 704 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 C11orf49Q9H6J7 331 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 SMCHD1A6NHR9 2005 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 ASTN1O14525 1302 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 ABCB11O95342 1321 aa16.9■□□□□ 0.3
DDX39A-217ENST00000592391 PTPDC1A2A3K4 754 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 CCDC69A6NI79 296 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 AKR1A1P14550 325 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 ACVR2BQ13705 512 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 SLC35G1Q2M3R5 365 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 ADCK5Q3MIX3 580 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 PRPF38BQ5VTL8 546 aaKnown RBP16.89■□□□□ 0.29
DDX39A-217ENST00000592391 SLC30A10Q6XR72 485 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 RNF207Q6ZRF8 634 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 DHX32Q7L7V1 743 aaKnown RBP16.89■□□□□ 0.29
DDX39A-217ENST00000592391 RGS22Q8NE09 1264 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 CTCFLQ8NI51 663 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-217ENST00000592391 LRRC2Q9BYS8 371 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 MAF1Q9H063 256 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 ABHD16BQ9H3Z7 469 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 RIOX1Q9H6W3 641 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 ADD3Q9UEY8 706 aaKnown RBP16.89■□□□□ 0.29
DDX39A-217ENST00000592391 ZHX1Q9UKY1 873 aaPredicted RBP16.89■□□□□ 0.29
DDX39A-217ENST00000592391 FRMPD3Q5JV73 1810 aa16.89■□□□□ 0.29
DDX39A-217ENST00000592391 DNM1LO00429 736 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 ZBTB5O15062 677 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 EPB41L2O43491 1005 aaKnown RBP16.88■□□□□ 0.29
DDX39A-217ENST00000592391 RARBP10826 455 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 COL6A1P12109 1028 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 KIF5BP33176 963 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 RPS6P62753 249 aaKnown RBP16.88■□□□□ 0.29
DDX39A-217ENST00000592391 EXOSC10Q01780 885 aaKnown RBP16.88■□□□□ 0.29
DDX39A-217ENST00000592391 SGMS1Q86VZ5 419 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 ARRDC4Q8NCT1 418 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 DPF3Q92784 378 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 PURBQ96QR8 312 aaKnown RBP16.88■□□□□ 0.29
DDX39A-217ENST00000592391 MYL10Q9BUA6 226 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 AMNQ9BXJ7 453 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 KATNBL1Q9H079 304 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 FAM184BQ9ULE4 1060 aa16.88■□□□□ 0.29
DDX39A-217ENST00000592391 LOC102724159A0A0B4J2E5 919 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 CYTH3O43739 400 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 HMGB1P09429 215 aaKnown RBP16.87■□□□□ 0.29
DDX39A-217ENST00000592391 CALM1P0DP23 149 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 CALM2P0DP24 149 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 CALM3P0DP25 149 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 CALML3P27482 149 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 PWP2Q15269 919 aaKnown RBP16.87■□□□□ 0.29
DDX39A-217ENST00000592391 MORC4Q8TE76 937 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 XPNPEP3Q9NQH7 507 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 MRPL11Q9Y3B7 192 aaKnown RBP16.87■□□□□ 0.29
DDX39A-217ENST00000592391 SNX14Q9Y5W7 946 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 SLC12A7Q9Y666 1083 aa16.87■□□□□ 0.29
DDX39A-217ENST00000592391 PPP1R11O60927 126 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-217ENST00000592391 ALDH5A1P51649 535 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-217ENST00000592391 GJC2Q5T442 439 aaPredicted RBP16.86■□□□□ 0.29
DDX39A-217ENST00000592391 HOMER1Q86YM7 354 aa16.86■□□□□ 0.29
DDX39A-217ENST00000592391 MCF2L2Q86YR7 1114 aa16.86■□□□□ 0.29
DDX39A-217ENST00000592391 TCEANC2Q96MN5 208 aa16.86■□□□□ 0.29
DDX39A-217ENST00000592391 PIGSQ96S52 555 aa16.86■□□□□ 0.29
DDX39A-217ENST00000592391 LZTS2Q9BRK4 669 aa16.86■□□□□ 0.29
DDX39A-217ENST00000592391 PNMA6FA0A0J9YX94 578 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 KBTBD13C9JR72 458 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 SMARCA1P28370 1054 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 GNAQP50148 359 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 TRAF1Q13077 416 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 LRRC41Q15345 812 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 CCDC144BQ3MJ40 725 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 DNERQ8NFT8 737 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 LENG1Q96BZ8 264 aaPredicted RBP16.85■□□□□ 0.29
DDX39A-217ENST00000592391 SPZ1Q9BXG8 430 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 PCDHA1Q9Y5I3 950 aa16.85■□□□□ 0.29
DDX39A-217ENST00000592391 DDX49Q9Y6V7 483 aaKnown RBP16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms