RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 CCP110O43303 1012 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 PRCPP42785 496 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 SEMA3FQ13275 785 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 IGSF22Q8N9C0 903 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 RASSF8Q8NHQ8 419 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 MTMR9Q96QG7 549 aa17.76■□□□□ 0.43
MBD1-227ENST00000592060 DHX36Q9H2U1 1008 aaKnown RBP17.76■□□□□ 0.43
MBD1-227ENST00000592060 MYH7BA7E2Y1 1941 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 COBLO75128 1261 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 NPM3O75607 178 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 CHRNA5P30532 468 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 CACNB3P54284 484 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 SYCP1Q15431 976 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 KMT5BQ4FZB7 885 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 PPP4R3BQ5MIZ7 849 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 SH3BP5LQ7L8J4 393 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 ADSSL1Q8N142 457 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 KIF18AQ8NI77 898 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 C7orf43Q8WVR3 580 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 PLIN2Q99541 437 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 BAG1Q99933 345 aaPredicted RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 MMTAG2Q9BU76 263 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 PDCL3Q9H2J4 239 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 RIC8AQ9NPQ8 531 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 DDTLA6NHG4 134 aaPredicted RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 MPHOSPH10O00566 681 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 STX10O60499 249 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 RHOBTB3O94955 611 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 CLK2P49760 499 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 ADKP55263 362 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 KRT31Q15323 416 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 MTERF4Q7Z6M4 381 aaKnown RBP17.75■□□□□ 0.43
MBD1-227ENST00000592060 REXO1L1PQ8IX06 675 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 ANKRD7Q92527 254 aa17.75■□□□□ 0.43
MBD1-227ENST00000592060 LRRC10BA6NIK2 292 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 TUBB4AP04350 444 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 CCDC96Q2M329 555 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 CNKSR1Q969H4 720 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 SERPINA10Q9UK55 444 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 ITIH6Q6UXX5 1313 aa17.74■□□□□ 0.43
MBD1-227ENST00000592060 SLC37A4O43826 429 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 TECP42680 631 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 SPAG1Q07617 926 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 TCP10Q12799 353 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 SHROOM1Q2M3G4 852 aaPredicted RBP17.73■□□□□ 0.43
MBD1-227ENST00000592060 MKL1Q969V6 931 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 FAM196BA6NMK8 535 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 USP17L10C9JJH3 530 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 ZBTB5O15062 677 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 TDP2O95551 362 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 SLC16A2P36021 539 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 FXR2P51116 673 aaKnown RBP eCLIP17.73■□□□□ 0.43
MBD1-227ENST00000592060 AOC3Q16853 763 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 FILIP1LQ4L180 1135 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 KCTD1Q719H9 257 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 GIMAP8Q8ND71 665 aaPredicted RBP17.73■□□□□ 0.43
MBD1-227ENST00000592060 PANX2Q96RD6 677 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 C7orf25Q9BPX7 421 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 NYAP2Q9P242 653 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 ZNF219Q9P2Y4 722 aaPredicted RBP17.73■□□□□ 0.43
MBD1-227ENST00000592060 PI4KBQ9UBF8 816 aa17.73■□□□□ 0.43
MBD1-227ENST00000592060 COL2A1P02458 1487 aaPredicted RBP17.72■□□□□ 0.43
MBD1-227ENST00000592060 AKR1B15C9JRZ8 316 aaPredicted RBP17.72■□□□□ 0.43
MBD1-227ENST00000592060 COPB1P53618 953 aaKnown RBP17.72■□□□□ 0.43
MBD1-227ENST00000592060 ATP2B2Q01814 1243 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 NCBP1Q09161 790 aaKnown RBP17.72■□□□□ 0.43
MBD1-227ENST00000592060 CALCRLQ16602 461 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 UBE2SQ16763 222 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 TCP11X2Q5H9J9 407 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 TATDN1Q6P1N9 297 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 TRIM9Q9C026 710 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 MAPK8IP1Q9UQF2 711 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 PPP2R2CQ9Y2T4 447 aa17.72■□□□□ 0.43
MBD1-227ENST00000592060 KCNJ18B7U540 433 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 EEF2P13639 858 aaKnown RBP17.71■□□□□ 0.43
MBD1-227ENST00000592060 KCNJ12Q14500 433 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 TRIM65Q6PJ69 517 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 SYT10Q6XYQ8 523 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 DCAF4Q8WV16 495 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 ATRNL1Q5VV63 1379 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 TRIM49BA6NDI0 452 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 H7C1D1 291 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 ZSCAN12O43309 604 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 CCT6AP40227 531 aaKnown RBP17.71■□□□□ 0.43
MBD1-227ENST00000592060 RBM5P52756 815 aaKnown RBP eCLIP17.71■□□□□ 0.43
MBD1-227ENST00000592060 PMS1P54277 932 aaKnown RBP17.71■□□□□ 0.43
MBD1-227ENST00000592060 ETF1P62495 437 aaKnown RBP17.71■□□□□ 0.43
MBD1-227ENST00000592060 RBL2Q08999 1139 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 GRB10Q13322 594 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 SLC15A2Q16348 729 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 CERKLQ49MI3 558 aaPredicted RBP17.71■□□□□ 0.43
MBD1-227ENST00000592060 IRF2BP1Q8IU81 584 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 SIAH1Q8IUQ4 282 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 CUL5Q93034 780 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 L2HGDHQ9H9P8 463 aa17.71■□□□□ 0.43
MBD1-227ENST00000592060 PHLPP2Q6ZVD8 1323 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 MFAP3LO75121 409 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 TXKP42681 527 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 TNNI2P48788 182 aa17.7■□□□□ 0.42
MBD1-227ENST00000592060 PPP4R3AQ6IN85 833 aa17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms