RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 DHX32Q7L7V1 743 aaKnown RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 HOMER1Q86YM7 354 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 MCF2L2Q86YR7 1114 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 ZNF654Q8IZM8 581 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 ANKLE1Q8NAG6 615 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 ARRDC4Q8NCT1 418 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 PIBF1Q8WXW3 757 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 SHISA4Q96DD7 197 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 JAKMIP1Q96N16 626 aaKnown RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 MPHOSPH6Q99547 160 aaKnown RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 CRISPLD2Q9H0B8 497 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 SENP2Q9HC62 589 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 GPHNQ9NQX3 736 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 ADD3Q9UEY8 706 aaKnown RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 NRBP1Q9UHY1 535 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 MAD2L2Q9UI95 211 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 FAM184BQ9ULE4 1060 aa11.71□□□□□ -0.53
BRCA1-227ENST00000591849 MRPL11Q9Y3B7 192 aaKnown RBP11.71□□□□□ -0.53
BRCA1-227ENST00000591849 ABCB11O95342 1321 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 DNAJC25-GNG10A0A024R161 153 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 PALM3A6NDB9 673 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 B4DLN1 442 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 SEPT4O43236 478 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 RARBP10826 455 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 TAL1P17542 331 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 LIFRP42702 1097 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 MRPL12P52815 198 aaKnown RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 QRICH1Q2TAL8 776 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 TSGA10IPQ3SY00 556 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 RNF207Q6ZRF8 634 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 NOL8Q76FK4 1167 aaKnown RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 ZNF467Q7Z7K2 595 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 RASEFQ8IZ41 740 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 TRPV1Q8NER1 839 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 PAWRQ96IZ0 340 aaKnown RBP11.7□□□□□ -0.54
BRCA1-227ENST00000591849 LZTS2Q9BRK4 669 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 MYL10Q9BUA6 226 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 AMNQ9BXJ7 453 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 JMJD4Q9H9V9 463 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 CYP39A1Q9NYL5 469 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 OGDHLQ9ULD0 1010 aa11.7□□□□□ -0.54
BRCA1-227ENST00000591849 SYNGAP1Q96PV0 1343 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 RANBP2P49792 3224 aaKnown RBP11.69□□□□□ -0.54
BRCA1-227ENST00000591849 RLFQ13129 1914 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 KBTBD13C9JR72 458 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 NFIBO00712 420 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 ZBTB5O15062 677 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 AKR1A1P14550 325 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 HSPA4P34932 840 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 TROAPQ12815 778 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 ACVR2BQ13705 512 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 ADCK5Q3MIX3 580 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 LHX8Q68G74 356 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 BLOC1S2Q6QNY1 142 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 MAMDC4Q6UXC1 1216 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 CCDC144CPQ8IYA2 1237 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 FAM133AQ8N9E0 248 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 RRP36Q96EU6 259 aaKnown RBP11.69□□□□□ -0.54
BRCA1-227ENST00000591849 TCEANC2Q96MN5 208 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 C11orf49Q9H6J7 331 aa11.69□□□□□ -0.54
BRCA1-227ENST00000591849 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.69□□□□□ -0.54
BRCA1-227ENST00000591849 SEC63Q9UGP8 760 aaKnown RBP11.69□□□□□ -0.54
BRCA1-227ENST00000591849 LAMA4Q16363 1823 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 SOWAHBA6NEL2 793 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 SNAI1O95863 264 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-227ENST00000591849 RXRAP19793 462 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 ARMCX2Q7L311 632 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 EEPD1Q7L9B9 569 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 RAB11FIP4Q86YS3 637 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 CLEC4DQ8WXI8 215 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 PIGSQ96S52 555 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 MAP3K14Q99558 947 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 ABHD16BQ9H3Z7 469 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 SPC25Q9HBM1 224 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 PCDHA1Q9Y5I3 950 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 SNX14Q9Y5W7 946 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 NR2E3Q9Y5X4 410 aa11.68□□□□□ -0.54
BRCA1-227ENST00000591849 A0A0G2JMZ2 1700 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 PNMA6FA0A0J9YX94 578 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 ZBTB43O43298 467 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 EPB41L2O43491 1005 aaKnown RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 EVI5O60447 810 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 CFBP00751 764 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 IGHA2P01877 340 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 ZNF865P0CJ78 1059 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 CASTP20810 708 aaKnown RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 RPS6P62753 249 aaKnown RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 EXOSC10Q01780 885 aaKnown RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 PDE4DQ08499 809 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 GJC2Q5T442 439 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 RNF180Q86T96 592 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 MICU3Q86XE3 530 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 CCDC82Q8N4S0 544 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 FANCBQ8NB91 859 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 DIS3LQ8TF46 1054 aaKnown RBP11.67□□□□□ -0.54
BRCA1-227ENST00000591849 USP26Q9BXU7 913 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 MAF1Q9H063 256 aa11.67□□□□□ -0.54
BRCA1-227ENST00000591849 RIOX1Q9H6W3 641 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms