RNA–Protein interactions for RNA: ENST00000590843.1

SEH1L-208, Transcript of SEH1 like nucleoporin, humanhuman

TSL 1 (best)

Gene SEH1L, Length 5,206 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEH1L-208ENST00000590843 PLA2G12BQ9BX93 195 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 MFSD1Q9H3U5 465 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 DDX19AQ9NUU7 478 aaKnown RBP12.69□□□□□ -0.38
SEH1L-208ENST00000590843 KIDINS220Q9ULH0 1771 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 NKRFO15226 690 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEH1L-208ENST00000590843 CIITAP33076 1130 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 PIK3AP1Q6ZUJ8 805 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 TBC1D22BQ9NU19 505 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 CAPN9O14815 690 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 STRNO43815 780 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 XRCC6P12956 609 aaKnown RBP eCLIP12.69□□□□□ -0.38
SEH1L-208ENST00000590843 TNNC1P63316 161 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 GLIPR1L2Q4G1C9 344 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 DSTYKQ6XUX3 929 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 TNKSO95271 1327 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 PER1O15534 1290 aaPredicted RBP12.69□□□□□ -0.38
SEH1L-208ENST00000590843 MAP3K7O43318 606 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 NEMFO60524 1076 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 CSPG5O95196 566 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 PSMC4P43686 418 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 CACNB3P54284 484 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 MYO1EQ12965 1108 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 SECISBP2LQ93073 1101 aaKnown RBP12.69□□□□□ -0.38
SEH1L-208ENST00000590843 ANKRD36BP1Q96IX9 119 aa12.69□□□□□ -0.38
SEH1L-208ENST00000590843 CETN3O15182 167 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 GJB2P29033 226 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 KRT76Q01546 638 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 NOLC1Q14978 699 aaKnown RBP eCLIP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 RSRC2Q7L4I2 434 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 SCFD2Q8WU76 684 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 OPTNQ96CV9 577 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 CCDC114Q96M63 670 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 MAK16Q9BXY0 300 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 USP25Q9UHP3 1055 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 MED23Q9ULK4 1368 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 STXBP3O00186 592 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 DYNC1LI2O43237 492 aaPredicted RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TNNI1P19237 187 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 CDC37Q16543 378 aaPredicted RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TSHZ3Q63HK5 1081 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 LLPHQ9BRT6 129 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 PUS3Q9BZE2 481 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 C2orf40Q9H1Z8 148 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TSPY26PQ9H489 355 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TNNQ9UQP3 1299 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 CAPN2P17655 700 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 IGFBP4P22692 258 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 NNMTP40261 264 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 ARPP19P56211 112 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TSPY1Q01534 308 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 PDZD4Q76G19 769 aaPredicted RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 RAVER2Q9HCJ3 691 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 RRN3P2A6NIE6 340 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TXNP10599 105 aaKnown RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 CD19P15391 556 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 SLC10A5Q5PT55 438 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 TTC38Q5R3I4 469 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 RNF219Q5W0B1 726 aaPredicted RBP12.68□□□□□ -0.38
SEH1L-208ENST00000590843 NEK8Q86SG6 692 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 SPATA33Q96N06 139 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 LRRC2Q9BYS8 371 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 PCDHA12Q9UN75 941 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 PAXBP1Q9Y5B6 917 aa12.68□□□□□ -0.38
SEH1L-208ENST00000590843 N4BP1O75113 896 aaKnown RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 SSTR3P32745 418 aaPredicted RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 PPATQ06203 517 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 ARMCX2Q7L311 632 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 USP44Q9H0E7 712 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 PPRC1Q5VV67 1664 aaKnown RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 EXOC3O60645 756 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 KCTD1Q719H9 257 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 TDRD7Q8NHU6 1098 aaKnown RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 DONSONQ9NYP3 566 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 POLRMTO00411 1230 aaKnown RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 PPP2R5DQ14738 602 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 EIF2AK2P19525 551 aaKnown RBP12.67□□□□□ -0.38
SEH1L-208ENST00000590843 SFNP31947 248 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 SDE2Q6IQ49 451 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 FAM83AQ86UY5 434 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 DGKHQ86XP1 1220 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 GPRC5DQ9NZD1 345 aa12.67□□□□□ -0.38
SEH1L-208ENST00000590843 KRT5P13647 590 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 APOBRQ0VD83 1088 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 NDUFAF2Q8N183 169 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 CEP170P1Q96L14 293 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 PPP1R9BQ96SB3 815 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 MMS19Q96T76 1030 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 ARGLU1Q9NWB6 273 aaPredicted RBP12.66□□□□□ -0.38
SEH1L-208ENST00000590843 DDX25Q9UHL0 483 aaKnown RBP12.66□□□□□ -0.38
SEH1L-208ENST00000590843 FARP1Q9Y4F1 1045 aaPredicted RBP12.66□□□□□ -0.38
SEH1L-208ENST00000590843 PNMA6FA0A0J9YX94 578 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 ADCY3O60266 1144 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 AMHP03971 560 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 BLIDQ8IZY5 108 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 CCDC26Q8TAB7 109 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 DACT1Q9NYF0 836 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 NEXMIFQ5QGS0 1516 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 GSTTP1A0A1W2PQM5 241 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 GOLGA6L10A6NI86 522 aa12.66□□□□□ -0.38
SEH1L-208ENST00000590843 PRPF40AO75400 957 aaKnown RBP12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms