RNA–Protein interactions for RNA: ENST00000590619.1

DNMT1-222, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 231 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-222ENST00000590619 TLK2Q86UE8 772 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 ADSSL1Q8N142 457 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 PPIL4Q8WUA2 492 aaKnown RBP eCLIP7.88□□□□□ -1.15
DNMT1-222ENST00000590619 ASIC4Q96FT7 647 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 AP5M1Q9H0R1 490 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 PDGFCQ9NRA1 345 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 CLDND1Q9NY35 253 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 PPP1R9AQ9ULJ8 1098 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
DNMT1-222ENST00000590619 COL4A6Q14031 1691 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 ZFHX4Q86UP3 3567 aa7.88□□□□□ -1.15
DNMT1-222ENST00000590619 STXBP3O00186 592 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 PITPNM1O00562 1244 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 UQCRFS1P1P0C7P4 283 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 NBL1P41271 181 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 SLC4A3P48751 1232 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 CNTN2Q02246 1040 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 DDX10Q13206 875 aaKnown RBP7.87□□□□□ -1.15
DNMT1-222ENST00000590619 CLUL1Q15846 466 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 PTPROQ16827 1216 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 CTC1Q2NKJ3 1217 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 CLEC10AQ8IUN9 316 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 MIGA1Q8NAN2 632 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 FBXO22Q8NEZ5 403 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 PPP1R13LQ8WUF5 828 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 RMDN1Q96DB5 314 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
DNMT1-222ENST00000590619 PIH1D3Q9NQM4 214 aaKnown RBP7.87□□□□□ -1.15
DNMT1-222ENST00000590619 Q9Y3F1 56 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 TET1Q8NFU7 2136 aa7.87□□□□□ -1.15
DNMT1-222ENST00000590619 TPRP12270 2363 aaKnown RBP7.86□□□□□ -1.15
DNMT1-222ENST00000590619 POLR3DP05423 398 aaPredicted RBP7.86□□□□□ -1.15
DNMT1-222ENST00000590619 SIGLEC14Q08ET2 396 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 NBPF20Q3BBV1 942 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 EPC2Q52LR7 807 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 IQSEC1Q6DN90 963 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 SNRNP48Q6IEG0 339 aaKnown RBP7.86□□□□□ -1.15
DNMT1-222ENST00000590619 TAPT1Q6NXT6 567 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 FAM117BQ6P1L5 589 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 TMEM179Q6ZVK1 233 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 ANKRD35Q8N283 1001 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 TEX13BQ9BXU2 312 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 ARHGEF10LQ9HCE6 1279 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 DDX49Q9Y6V7 483 aaKnown RBP7.86□□□□□ -1.15
DNMT1-222ENST00000590619 EPG5Q9HCE0 2579 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 SCN5AQ14524 2016 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 MYO7AQ13402 2215 aa7.86□□□□□ -1.15
DNMT1-222ENST00000590619 PLXNA3P51805 1871 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 LOC730098B7Z3J9 87 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 H3BNC9 293 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 GALR2O43603 387 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-222ENST00000590619 NCK2O43639 380 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 IGSF3O75054 1194 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 UBTFL1P0CB47 393 aaPredicted RBP7.85□□□□□ -1.15
DNMT1-222ENST00000590619 AKR1B1P15121 316 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 ZAP70P43403 619 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 NUBP1P53384 320 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 PURAQ00577 322 aaKnown RBP7.85□□□□□ -1.15
DNMT1-222ENST00000590619 GPM6BQ13491 265 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 TIGD5Q53EQ6 642 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 FAM83BQ5T0W9 1011 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.85□□□□□ -1.15
DNMT1-222ENST00000590619 DGLUCYQ7Z3D6 616 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 RPAINQ86UA6 219 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 CPXCR1Q8N123 301 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 CRBNQ96SW2 442 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 NSUN3Q9H649 340 aaKnown RBP7.85□□□□□ -1.15
DNMT1-222ENST00000590619 INSL6Q9Y581 213 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 CDK5RAP2Q96SN8 1893 aa7.85□□□□□ -1.15
DNMT1-222ENST00000590619 PTPRCP08575 1304 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 ABHD14A-ACY1A0A1B0GW23 586 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 ATP2A1O14983 1001 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 NBNO60934 754 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 PDGFBP01127 241 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 CXCL10P02778 98 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 CYP2D6P10635 497 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 EEF2P13639 858 aaKnown RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 ICA1Q05084 483 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 HYAL1Q12794 435 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 SMAD4Q13485 552 aaKnown RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 BFSP2Q13515 415 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 CBX2Q14781 532 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 CNKSR3Q6P9H4 555 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 EEPD1Q7L9B9 569 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 FRMD5Q7Z6J6 570 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 FAM133AQ8N9E0 248 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 NKD2Q969F2 451 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 DYNLL2Q96FJ2 89 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 PRKRIP1Q9H875 184 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 RAVER2Q9HCJ3 691 aaKnown RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 DNAH14Q0VDD8 3507 aa7.84□□□□□ -1.15
DNMT1-222ENST00000590619 KMT2BQ9UMN6 2715 aaPredicted RBP7.84□□□□□ -1.15
DNMT1-222ENST00000590619 CHD8Q9HCK8 2581 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 MYL3P08590 195 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 GTF2F1P35269 517 aaKnown RBP eCLIP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 HTRA4P83105 476 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 MKRN4PQ13434 485 aaPredicted RBP7.83□□□□□ -1.16
DNMT1-222ENST00000590619 ADAM15Q13444 863 aa7.83□□□□□ -1.16
DNMT1-222ENST00000590619 LRRFIP1Q32MZ4 808 aaKnown RBP7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms