RNA–Protein interactions for RNA: ENST00000589897.1

TPM4-211, Transcript of tropomyosin 4, humanhuman

TSL 4

Gene TPM4, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-211ENST00000589897 IQCA1Q86XH1 822 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 MSL3Q8N5Y2 521 aaKnown RBP9.77□□□□□ -0.85
TPM4-211ENST00000589897 TRERF1Q96PN7 1200 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 PRDM12Q9H4Q4 367 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 RNF146Q9NTX7 359 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 CTNNA3Q9UI47 895 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 MSRAQ9UJ68 235 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 ZHX1Q9UKY1 873 aaPredicted RBP9.77□□□□□ -0.85
TPM4-211ENST00000589897 FAM184BQ9ULE4 1060 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 MUC3AQ02505 3323 aa9.77□□□□□ -0.85
TPM4-211ENST00000589897 PLA2G6O60733 806 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 FGRP09769 529 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 ADCYAP1R1P41586 468 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 SNAP25P60880 206 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 TLE2Q04725 743 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 RUFY2Q8WXA3 655 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 FERMT2Q96AC1 680 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 AGBL1Q96MI9 1066 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 TTC14Q96N46 770 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 TMEM47Q9BQJ4 181 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 SPC25Q9HBM1 224 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 GPCPD1Q9NPB8 672 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 TCP11L1Q9NUJ3 509 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 TMEM39AQ9NV64 488 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 CCPG1Q9ULG6 757 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 PRR12Q9ULL5 1215 aa9.76□□□□□ -0.85
TPM4-211ENST00000589897 DCDC2CA8MYV0 355 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 PGK1P00558 417 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 IGHA2P01877 340 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 TAL1P17542 331 aaPredicted RBP9.75□□□□□ -0.85
TPM4-211ENST00000589897 SLC16A2P36021 539 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 NT5C2P49902 561 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 LRRC41Q15345 812 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 RAB30Q15771 203 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 TTC22Q5TAA0 569 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 SYDE2Q5VT97 1194 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 NSMFQ6X4W1 530 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 NOL8Q76FK4 1167 aaKnown RBP9.75□□□□□ -0.85
TPM4-211ENST00000589897 ZNF467Q7Z7K2 595 aaPredicted RBP9.75□□□□□ -0.85
TPM4-211ENST00000589897 HERVK_113Q902F9 699 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 ZKSCAN3Q9BRR0 538 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 DSCC1Q9BVC3 393 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 ABHD16BQ9H3Z7 469 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 EPHX3Q9H6B9 360 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 KAT14Q9H8E8 782 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 CNNM2Q9H8M5 875 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.75□□□□□ -0.85
TPM4-211ENST00000589897 PNMA2Q9UL42 364 aa9.75□□□□□ -0.85
TPM4-211ENST00000589897 FRMPD2Q68DX3 1309 aaPredicted RBP9.75□□□□□ -0.85
TPM4-211ENST00000589897 DNAJC25-GNG10A0A024R161 153 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 ASB14A6NK59 587 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 KDM4AO75164 1064 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 ICAM1P05362 532 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 ZNF865P0CJ78 1059 aaPredicted RBP9.74□□□□□ -0.85
TPM4-211ENST00000589897 ITGB8P26012 769 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 MRE11P49959 708 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 EPHB4P54760 987 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 TRDNQ13061 729 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 PPIGQ13427 754 aaKnown RBP eCLIP9.74□□□□□ -0.85
TPM4-211ENST00000589897 ACVR2BQ13705 512 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 TTBK2Q6IQ55 1244 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 MAMDC4Q6UXC1 1216 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 ARMCX2Q7L311 632 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 TBC1D10CQ8IV04 446 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 VTI1AQ96AJ9 217 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 TOX2Q96NM4 488 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 NECAB3Q96P71 396 aaPredicted RBP9.74□□□□□ -0.85
TPM4-211ENST00000589897 UBAC1Q9BSL1 405 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 PBX4Q9BYU1 374 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 KRT23Q9C075 422 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 SLC28A3Q9HAS3 691 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 A1CFQ9NQ94 594 aaKnown RBP9.74□□□□□ -0.85
TPM4-211ENST00000589897 MCM3APO60318 1980 aa9.74□□□□□ -0.85
TPM4-211ENST00000589897 PTPDC1A2A3K4 754 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 B4E1Z4 1266 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 DHX16O60231 1041 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 SNAI1O95863 264 aaPredicted RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 C6orf222P0C671 652 aaPredicted RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 PDHBP11177 359 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 NOVP48745 357 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 CNTN2Q02246 1040 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 ADGRE1Q14246 886 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 SKIV2LQ15477 1246 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 CCDC144BQ3MJ40 725 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 GPATCH4Q5T3I0 446 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.73□□□□□ -0.85
TPM4-211ENST00000589897 RASGRP2Q7LDG7 609 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 DGKHQ86XP1 1220 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 CCDC144CPQ8IYA2 1237 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 PCSK9Q8NBP7 692 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 NUP133Q8WUM0 1156 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 ZSCAN10Q96SZ4 725 aaPredicted RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 MPHOSPH6Q99547 160 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 MTIF3Q9H2K0 278 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 ADD3Q9UEY8 706 aaKnown RBP9.73□□□□□ -0.85
TPM4-211ENST00000589897 COG5Q9UP83 839 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 ZNF536O15090 1300 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 NEDD4P46934 1319 aa9.73□□□□□ -0.85
TPM4-211ENST00000589897 LAMA4Q16363 1823 aa9.72□□□□□ -0.85
TPM4-211ENST00000589897 DUSP11O75319 330 aaKnown RBP9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms