RNA–Protein interactions for RNA: ENST00000589857.1

ZNF540-208, Transcript of zinc finger protein 540, humanhuman

TSL 4

Gene ZNF540, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-208ENST00000589857 DPYDQ12882 1025 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 TRIM14Q14142 442 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 DIXDC1Q155Q3 683 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 NPY5RQ15761 445 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 ASPRV1Q53RT3 343 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 SPECC1Q5M775 1068 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 SPECC1LQ69YQ0 1117 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 PPP1R18Q6NYC8 613 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 NYAP1Q6ZVC0 841 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 PDILTQ8N807 584 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 CSRNP1Q96S65 589 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 NAP1L4Q99733 375 aaKnown RBP11.99□□□□□ -0.49
ZNF540-208ENST00000589857 TMEM47Q9BQJ4 181 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 NAA15Q9BXJ9 866 aaKnown RBP11.99□□□□□ -0.49
ZNF540-208ENST00000589857 DBNDD1Q9H9R9 158 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 FANCLQ9NW38 375 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 MAD2L2Q9UI95 211 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 STX8Q9UNK0 236 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 FLT1P17948 1338 aa11.99□□□□□ -0.49
ZNF540-208ENST00000589857 A0A087WWV3 80 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 RIMBP2O15034 1052 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 ECE2O60344 883 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 NMT2O60551 498 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 HLA-DOAP06340 250 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 MCM7P33993 719 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 MMP14P50281 582 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 NONOQ15233 471 aaKnown RBP eCLIP11.98□□□□□ -0.49
ZNF540-208ENST00000589857 ISM2Q6H9L7 571 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 HEATR3Q7Z4Q2 680 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 FOXP4Q8IVH2 680 aaPredicted RBP11.98□□□□□ -0.49
ZNF540-208ENST00000589857 PDCL2Q8N4E4 241 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 AGBL3Q8NEM8 1001 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 RASSF8Q8NHQ8 419 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 NOC3LQ8WTT2 800 aaKnown RBP11.98□□□□□ -0.49
ZNF540-208ENST00000589857 CCDC51Q96ER9 411 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 DYNLL2Q96FJ2 89 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 GLT8D2Q9H1C3 349 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 IL17RBQ9NRM6 502 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 GGA3Q9NZ52 723 aa11.98□□□□□ -0.49
ZNF540-208ENST00000589857 hCG_1642624A0A1W2PR95 340 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 ADM5C9JUS6 153 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 KLRF2D3W0D1 207 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 STXBP3O00186 592 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 STX10O60499 249 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 VIL1P09327 827 aaKnown RBP11.97□□□□□ -0.49
ZNF540-208ENST00000589857 PRR29P0C7W0 189 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 ATP1A3P13637 1013 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 UBA7P41226 1012 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 STAT6P42226 847 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 NOVP48745 357 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 NAPAP54920 295 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 AMPD3Q01432 767 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 GRIN1Q05586 938 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 SREBF2Q12772 1141 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 WWC2Q6AWC2 1192 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 ARMCX5Q6P1M9 558 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 PPFIBP1Q86W92 1011 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 CDCA5Q96FF9 252 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 EPSTI1Q96J88 318 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 ZIC5Q96T25 663 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 SRRTQ9BXP5 876 aaKnown RBP11.97□□□□□ -0.49
ZNF540-208ENST00000589857 RAB34Q9BZG1 259 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 ZMYND12Q9H0C1 365 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 HSD3B7Q9H2F3 369 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 SAP30BPQ9UHR5 308 aaKnown RBP11.97□□□□□ -0.49
ZNF540-208ENST00000589857 RWDD2AQ9UIY3 292 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 JAG2Q9Y219 1238 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.97□□□□□ -0.49
ZNF540-208ENST00000589857 CASP8AP2Q9UKL3 1982 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 MYH13Q9UKX3 1938 aa11.97□□□□□ -0.49
ZNF540-208ENST00000589857 PHLPP2Q6ZVD8 1323 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 PITPNM2Q9BZ72 1349 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 A0A1B0GTH6 734 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 USP17L3A6NCW0 530 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 USP17L4A6NCW7 530 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 FAM205CA6NFA0 338 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 SMIM22K7EJ46 135 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 AFMP43652 599 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 RHBDL3P58872 404 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 FKBP1AP62942 108 aaKnown RBP11.96□□□□□ -0.49
ZNF540-208ENST00000589857 KCNB1Q14721 858 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 E2F4Q16254 413 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 NOM1Q5C9Z4 860 aaKnown RBP11.96□□□□□ -0.49
ZNF540-208ENST00000589857 ZNF658Q5TYW1 1059 aaPredicted RBP11.96□□□□□ -0.49
ZNF540-208ENST00000589857 RRAGBQ5VZM2 374 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 USP17L1Q7RTZ2 530 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 OGFOD1Q8N543 542 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 SHISA4Q96DD7 197 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 ERO1AQ96HE7 468 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 CCDC17Q96LX7 622 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 PANX2Q96RD6 677 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 CCSER1Q9C0I3 900 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 LRRC27Q9C0I9 530 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 PCDHA6Q9UN73 950 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 PCDHA8Q9Y5H6 950 aa11.96□□□□□ -0.49
ZNF540-208ENST00000589857 ITIH6Q6UXX5 1313 aa11.95□□□□□ -0.5
ZNF540-208ENST00000589857 M0R2N6 131 aa11.95□□□□□ -0.5
ZNF540-208ENST00000589857 SLC26A4O43511 780 aa11.95□□□□□ -0.5
ZNF540-208ENST00000589857 ALDH1A1P00352 501 aa11.95□□□□□ -0.5
ZNF540-208ENST00000589857 BMP6P22004 513 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms