RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 CFAP73A6NFT4 308 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ZNF804AQ7Z570 1209 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 TRIM42Q8IWZ5 723 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 HVCN1Q96D96 273 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 DCAF5Q96JK2 942 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 SEC23IPQ9Y6Y8 1000 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ZNF532Q9HCE3 1301 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 MYL1P05976 194 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ADCY2Q08462 1091 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 BLIDQ8IZY5 108 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 GABPB2Q8TAK5 448 aaPredicted RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 NLRP7Q8WX94 980 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 EDC3Q96F86 508 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 PSMD1Q99460 953 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 VIPAS39Q9H9C1 493 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 SART1O43290 800 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ZAP70P43403 619 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD20A4Q4UJ75 823 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD20A8PQ5CZ79 823 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD20A2Q5SQ80 823 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD20A1Q5TYW2 823 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 GALNT17Q6IS24 598 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 DCUN1D2Q6PH85 259 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ZCRB1Q8TBF4 217 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 YY1AP1Q9H869 796 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 MOCS3O95396 460 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 LARGE1O95461 756 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 SPDL1Q96EA4 605 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 KCNF1Q9H3M0 494 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 MRPL44Q9H9J2 332 aaKnown RBP15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 PLAAQ9Y263 795 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 ZDHHC9Q9Y397 364 aa15.98■□□□□ 0.15
SMARCA4-214ENST00000589677 GCNT3O95395 438 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 ESRRGP62508 458 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 ACTN3Q08043 901 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 ARHGAP44Q17R89 818 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 THAP9Q9H5L6 903 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 LMNB1P20700 586 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 TRAPPC10P48553 1259 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 NLRP14Q86W24 1093 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 CTAGE3PQ8IX95 158 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 ARHGAP18Q8N392 663 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 MAGOHBQ96A72 148 aaKnown RBP15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 PCDHA13Q9Y5I0 950 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 ABCA8O94911 1581 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 RASGRF2O14827 1237 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 CRCPO75575 148 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 PTPN21Q16825 1174 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 GEN1Q17RS7 908 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 NFU1Q9UMS0 254 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 TRIM66O15016 1216 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 MAPK13O15264 365 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 CYP2E1P05181 493 aaPredicted RBP15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 CCDC93Q567U6 631 aa15.97■□□□□ 0.15
SMARCA4-214ENST00000589677 FTOQ9C0B1 505 aaKnown RBP eCLIP15.97■□□□□ 0.152e-7■■■□□ 16.1
SMARCA4-214ENST00000589677 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 KDRP35968 1356 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 MED23Q9ULK4 1368 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 TARSL2A2RTX5 802 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 PLTPP55058 493 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 LMNB2Q03252 620 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 SIRT2Q8IXJ6 389 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 RUBCNQ92622 972 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 HOXA7P31268 230 aaPredicted RBP15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 SLC7A5Q01650 507 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 PTGDRQ13258 359 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 TMED1Q13445 227 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 NME8Q8N427 588 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 OGFOD1Q8N543 542 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 P2RX5Q93086 422 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 ZMAT2Q96NC0 199 aaKnown RBP15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 SYNMO15061 1565 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 ADAMTS2O95450 1211 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 PDE6CP51160 858 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 USP14P54578 494 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 MYCT1Q8N699 235 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 ANKRD2Q9GZV1 360 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 RAB20Q9NX57 234 aa15.96■□□□□ 0.15
SMARCA4-214ENST00000589677 MEFVO15553 781 aaPredicted RBP15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 ITGA6P23229 1130 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 ARHGAP4P98171 946 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 MAN2A1Q16706 1144 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 TTLL7Q6ZT98 887 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 TMTC3Q6ZXV5 915 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 RSAD2Q8WXG1 361 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 FMO2Q99518 471 aa15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 ZBTB12Q9Y330 459 aaPredicted RBP15.96■□□□□ 0.14
SMARCA4-214ENST00000589677 ARHGEF35A5YM69 484 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 N4BP1O75113 896 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 CYP21A2P08686 494 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 REXO1Q8N1G1 1221 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 COG1Q8WTW3 980 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 ELAC2Q9BQ52 826 aaKnown RBP15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 STOML1Q9UBI4 398 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 CCDC188H7C350 402 aa15.95■□□□□ 0.14
SMARCA4-214ENST00000589677 DCTN3O75935 186 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms