RNA–Protein interactions for RNA: ENST00000589078.1

APOC1-204, Transcript of apolipoprotein C1, humanhuman

TSL 2

Gene APOC1, Length 213 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-204ENST00000589078 CDX2Q99626 313 aaPredicted RBP11.27□□□□□ -0.61
APOC1-204ENST00000589078 LBHD1Q9BQE6 289 aaPredicted RBP11.27□□□□□ -0.61
APOC1-204ENST00000589078 RANBP17Q9H2T7 1088 aaKnown RBP11.27□□□□□ -0.61
APOC1-204ENST00000589078 CCPG1Q9ULG6 757 aa11.27□□□□□ -0.61
APOC1-204ENST00000589078 SH2B2O14492 632 aaPredicted RBP11.26□□□□□ -0.61
APOC1-204ENST00000589078 DDAH1O94760 285 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 ICAM1P05362 532 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 HOXC6P09630 235 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 GOLGA8HP0CJ92 632 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 CALM1P0DP23 149 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 CALM2P0DP24 149 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 CALM3P0DP25 149 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 LIFRP42702 1097 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 GNAQP50148 359 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 ANTXR2P58335 489 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 CCL14Q16627 93 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 MFSD14CQ5VZR4 134 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 BLOC1S2Q6QNY1 142 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 RASGRP2Q7LDG7 609 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 RASEFQ8IZ41 740 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 ANKRD35Q8N283 1001 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 CTCFLQ8NI51 663 aaPredicted RBP11.26□□□□□ -0.61
APOC1-204ENST00000589078 USP6NLQ92738 828 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 KCNB2Q92953 911 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 DDX11Q96FC9 970 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 JAKMIP1Q96N16 626 aaKnown RBP11.26□□□□□ -0.61
APOC1-204ENST00000589078 ACAD9Q9H845 621 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 LY9Q9HBG7 655 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 SLC12A7Q9Y666 1083 aa11.26□□□□□ -0.61
APOC1-204ENST00000589078 ALAS1P13196 640 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 TRAF1Q13077 416 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 GRM4Q14833 912 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 ZNF654Q8IZM8 581 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 NUP133Q8WUM0 1156 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 MYLIPQ8WY64 445 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 TRERF1Q96PN7 1200 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 MAP3K14Q99558 947 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 LZTS2Q9BRK4 669 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 USP26Q9BXU7 913 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 SENP6Q9GZR1 1112 aaPredicted RBP11.25□□□□□ -0.61
APOC1-204ENST00000589078 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 RNF146Q9NTX7 359 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 SNX14Q9Y5W7 946 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 BDP1A6H8Y1 2624 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 RLFQ13129 1914 aa11.25□□□□□ -0.61
APOC1-204ENST00000589078 KLRF2D3W0D1 207 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 ATN1P54259 1190 aaPredicted RBP11.24□□□□□ -0.61
APOC1-204ENST00000589078 SNAP25P60880 206 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 TROAPQ12815 778 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 OLFML2BQ68BL8 750 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.24□□□□□ -0.61
APOC1-204ENST00000589078 SGMS1Q86VZ5 419 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 ADGRF4Q8IZF3 695 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 AGBL1Q96MI9 1066 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 UBA5Q9GZZ9 404 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 SEMA6BQ9H3T3 888 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 DIS3Q9Y2L1 958 aaKnown RBP11.24□□□□□ -0.61
APOC1-204ENST00000589078 RIPK3Q9Y572 518 aa11.24□□□□□ -0.61
APOC1-204ENST00000589078 MYH4Q9Y623 1939 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 PALM3A6NDB9 673 aaPredicted RBP11.23□□□□□ -0.61
APOC1-204ENST00000589078 CASTP20810 708 aaKnown RBP11.23□□□□□ -0.61
APOC1-204ENST00000589078 EXOSC10Q01780 885 aaKnown RBP11.23□□□□□ -0.61
APOC1-204ENST00000589078 SHHQ15465 462 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 CDC37Q16543 378 aaPredicted RBP11.23□□□□□ -0.61
APOC1-204ENST00000589078 ADCK5Q3MIX3 580 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 C9orf50Q5SZB4 431 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 LRRC2Q9BYS8 371 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 SENP2Q9HC62 589 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 VAT1LQ9HCJ6 419 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 PRKAG2Q9UGJ0 569 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 MAD2L2Q9UI95 211 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 ZNF536O15090 1300 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 CHD9Q3L8U1 2897 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 A0A0G2JMZ2 1700 aa11.23□□□□□ -0.61
APOC1-204ENST00000589078 ZBTB43O43298 467 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 COBLO75128 1261 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 ABCB11O95342 1321 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 PGK2P07205 417 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 FOSL2P15408 326 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 RPS6KB1P23443 525 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 RCAN1P53805 252 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 RTP1P59025 263 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 ANAPC15P60006 121 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 MICU3Q86XE3 530 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 FBXO11Q86XK2 927 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 STAG2Q8N3U4 1231 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 MSL3Q8N5Y2 521 aaKnown RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 MAML3Q96JK9 1138 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 TM6SF1Q9BZW5 370 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 TTYH1Q9H313 450 aaPredicted RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 RBM28Q9NW13 759 aaKnown RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 SEC63Q9UGP8 760 aaKnown RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 NAP1L2Q9ULW6 460 aaPredicted RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 MRPL11Q9Y3B7 192 aaKnown RBP11.22□□□□□ -0.61
APOC1-204ENST00000589078 CYP46A1Q9Y6A2 500 aa11.22□□□□□ -0.61
APOC1-204ENST00000589078 CCDC196A0A1B0GTZ2 297 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 ZBTB5O15062 677 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 COL9A1P20849 921 aa11.21□□□□□ -0.61
APOC1-204ENST00000589078 SMARCA1P28370 1054 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms