RNA–Protein interactions for RNA: ENST00000588617.1

VMP1-208, Transcript of vacuole membrane protein 1, humanhuman

TSL 4

Gene VMP1, Length 884 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-208ENST00000588617 PCDHA8Q9Y5H6 950 aa9.99□□□□□ -0.81
VMP1-208ENST00000588617 SHISA8B8ZZ34 492 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 ADAMTS2O95450 1211 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 RAC1P63000 192 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 NXNQ6DKJ4 435 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 DENND5AQ6IQ26 1287 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 ABHD17CQ6PCB6 329 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 FAM9AQ8IZU1 332 aaPredicted RBP9.98□□□□□ -0.81
VMP1-208ENST00000588617 JPH3Q8WXH2 748 aaPredicted RBP9.98□□□□□ -0.81
VMP1-208ENST00000588617 ORAI3Q9BRQ5 295 aa9.98□□□□□ -0.81
VMP1-208ENST00000588617 PRPF3O43395 683 aaKnown RBP9.97□□□□□ -0.81
VMP1-208ENST00000588617 GLRX3O76003 335 aaKnown RBP9.97□□□□□ -0.81
VMP1-208ENST00000588617 PRKD3O94806 890 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 SLITRK5O94991 958 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 FKBP9O95302 570 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 KCNA6P17658 529 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 ADCYAP1R1P41586 468 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 SCRN1Q12765 414 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 BRD3Q15059 726 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 PTPN21Q16825 1174 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 GFOD2Q3B7J2 385 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 FKBP9P1Q75LS8 142 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 FMR1NBQ8N0W7 255 aaPredicted RBP9.97□□□□□ -0.81
VMP1-208ENST00000588617 KREMEN2Q8NCW0 462 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 LUC7LQ9NQ29 371 aaKnown RBP9.97□□□□□ -0.81
VMP1-208ENST00000588617 PRR13Q9NZ81 148 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 IP6K2Q9UHH9 426 aa9.97□□□□□ -0.81
VMP1-208ENST00000588617 A0A0A0MRY4 1105 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 CBX4O00257 560 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 GAS7O60861 476 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 LRRN2O75325 713 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 ABLIM3O94929 683 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 F2P00734 622 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 RAB6AP20340 208 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 CYP4F3Q08477 520 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 PPIL6Q8IXY8 311 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 MAGEB6Q8N7X4 407 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 IGSF22Q8N9C0 903 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 GPR101Q96P66 508 aaPredicted RBP9.96□□□□□ -0.82
VMP1-208ENST00000588617 PHF20Q9BVI0 1012 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 ZKSCAN5Q9Y2L8 839 aa9.96□□□□□ -0.82
VMP1-208ENST00000588617 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.95□□□□□ -0.82
VMP1-208ENST00000588617 RFPL1O75677 317 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 CT47B1P0C2W7 299 aaPredicted RBP9.95□□□□□ -0.82
VMP1-208ENST00000588617 CCND1P24385 295 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 POU4F1Q01851 419 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 ABCB5Q2M3G0 1257 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 TSHZ1Q6ZSZ6 1077 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 ZC3H7AQ8IWR0 971 aaKnown RBP9.95□□□□□ -0.82
VMP1-208ENST00000588617 IFNL3Q8IZI9 196 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 SMC1BQ8NDV3 1235 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 MENTQ9BUN1 341 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 RHOBTB2Q9BYZ6 727 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 DAGLAQ9Y4D2 1042 aa9.95□□□□□ -0.82
VMP1-208ENST00000588617 H0Y8X5 98 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 MEIS1O00470 390 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 CREB3O43889 395 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 MYBL2P10244 700 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 DSG1Q02413 1049 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 ATP13A4Q4VNC1 1196 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 ANKRD34AQ69YU3 496 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 ZC3HAV1Q7Z2W4 902 aaKnown RBP9.94□□□□□ -0.82
VMP1-208ENST00000588617 TMC3Q7Z5M5 1100 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 SAMD3Q8N6K7 520 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 MRPL18Q9H0U6 180 aaKnown RBP9.94□□□□□ -0.82
VMP1-208ENST00000588617 CABP5Q9NP86 173 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 CHST12Q9NRB3 414 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 RNF112Q9ULX5 631 aa9.94□□□□□ -0.82
VMP1-208ENST00000588617 LUC7L2Q9Y383 392 aaKnown RBP9.94□□□□□ -0.82
VMP1-208ENST00000588617 BCRP11274 1271 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 USP11P51784 963 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 GPR85P60893 370 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 TCIRG1Q13488 830 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 ZFYVE21Q9BQ24 234 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 ACSS3Q9H6R3 686 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 PRDM10Q9NQV6 1147 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 CHST7Q9NS84 486 aa9.93□□□□□ -0.82
VMP1-208ENST00000588617 THG1LQ9NWX6 298 aaKnown RBP9.93□□□□□ -0.82
VMP1-208ENST00000588617 WDR64B1ANS9 1081 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 STXBP3O00186 592 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 SIGLEC6O43699 453 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 LDHAP00338 332 aaKnown RBP9.92□□□□□ -0.82
VMP1-208ENST00000588617 THBDP07204 575 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 SRGAP2CP0DJJ0 459 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 CYP7A1P22680 504 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 CWF19L1Q69YN2 538 aaKnown RBP9.92□□□□□ -0.82
VMP1-208ENST00000588617 IGF2-ASQ6U949 168 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 RSPO2Q6UXX9 243 aaPredicted RBP9.92□□□□□ -0.82
VMP1-208ENST00000588617 C11orf74Q86VG3 221 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 AGGF1Q8N302 714 aaeCLIP9.92□□□□□ -0.82
VMP1-208ENST00000588617 SLC39A13Q96H72 371 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 GPRC5CQ9NQ84 441 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 TPX2Q9ULW0 747 aaKnown RBP9.92□□□□□ -0.82
VMP1-208ENST00000588617 MINPP1Q9UNW1 487 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 COQ6Q9Y2Z9 468 aa9.92□□□□□ -0.82
VMP1-208ENST00000588617 ARVCFO00192 962 aa9.91□□□□□ -0.82
VMP1-208ENST00000588617 MEFVO15553 781 aaPredicted RBP9.91□□□□□ -0.82
VMP1-208ENST00000588617 SNUPNO95149 360 aaKnown RBP9.91□□□□□ -0.82
VMP1-208ENST00000588617 MT-CO1P00395 513 aa9.91□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms