RNA–Protein interactions for RNA: ENST00000588230.5

CIRBP-217, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,013 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-217ENST00000588230 MSL3Q8N5Y2 521 aaKnown RBP22.38■■□□□ 1.17
CIRBP-217ENST00000588230 NEK1Q96PY6 1258 aa22.38■■□□□ 1.17
CIRBP-217ENST00000588230 NRBP1Q9UHY1 535 aa22.38■■□□□ 1.17
CIRBP-217ENST00000588230 LAMA3Q16787 3333 aa22.38■■□□□ 1.17
CIRBP-217ENST00000588230 ZNF865P0CJ78 1059 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-217ENST00000588230 KRT32Q14532 448 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 GRM4Q14833 912 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 CDC37Q16543 378 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-217ENST00000588230 ANO1Q5XXA6 986 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 MAMDC4Q6UXC1 1216 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 NFXL1Q6ZNB6 911 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 ZNF467Q7Z7K2 595 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-217ENST00000588230 LY9Q9HBG7 655 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 GPHNQ9NQX3 736 aaPredicted RBP22.37■■□□□ 1.17
CIRBP-217ENST00000588230 MAD2L2Q9UI95 211 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 CNPY2Q9Y2B0 182 aa22.37■■□□□ 1.17
CIRBP-217ENST00000588230 PALM3A6NDB9 673 aaPredicted RBP22.36■■□□□ 1.17
CIRBP-217ENST00000588230 CNTN2Q02246 1040 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 TROAPQ12815 778 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 TSGA10IPQ3SY00 556 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 USH1GQ495M9 461 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 CHRDL2Q6WN34 429 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 RASEFQ8IZ41 740 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 FAM133AQ8N9E0 248 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 NUP133Q8WUM0 1156 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 JMJD4Q9H9V9 463 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 CYP39A1Q9NYL5 469 aa22.36■■□□□ 1.17
CIRBP-217ENST00000588230 SYNGAP1Q96PV0 1343 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 CCDC69A6NI79 296 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 DNM1LO00429 736 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 SH2B2O14492 632 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-217ENST00000588230 SNAI1O95863 264 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-217ENST00000588230 COL9A3Q14050 684 aaPredicted RBP22.35■■□□□ 1.17
CIRBP-217ENST00000588230 LRRC26Q2I0M4 334 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 C7orf61Q8IZ16 206 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 ZNF654Q8IZM8 581 aa22.35■■□□□ 1.17
CIRBP-217ENST00000588230 SZT2Q5T011 3432 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 NFIBO00712 420 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 DDAH1O94760 285 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 LIFRP42702 1097 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 QRICH1Q2TAL8 776 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 CLEC4DQ8WXI8 215 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 LRRC2Q9BYS8 371 aa22.34■■□□□ 1.17
CIRBP-217ENST00000588230 LCTP09848 1927 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 MCM3APO60318 1980 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 PTPDC1A2A3K4 754 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 SOWAHBA6NEL2 793 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 HSPA4P34932 840 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 BAATQ14032 418 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 ADCK5Q3MIX3 580 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 GJC2Q5T442 439 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 DHX32Q7L7V1 743 aaKnown RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 FBXO11Q86XK2 927 aa22.33■■□□□ 1.17
CIRBP-217ENST00000588230 CTCFLQ8NI51 663 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 RBM27Q9P2N5 1060 aaKnown RBP22.33■■□□□ 1.17
CIRBP-217ENST00000588230 ASTN1O14525 1302 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 HMGB1P09429 215 aaKnown RBP22.32■■□□□ 1.16
CIRBP-217ENST00000588230 KIF5BP33176 963 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 RNF207Q6ZRF8 634 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 ARMCX2Q7L311 632 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 LENG1Q96BZ8 264 aaPredicted RBP22.32■■□□□ 1.16
CIRBP-217ENST00000588230 MAP3K14Q99558 947 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 MYL10Q9BUA6 226 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 SLC12A7Q9Y666 1083 aa22.32■■□□□ 1.16
CIRBP-217ENST00000588230 BAZ2BQ9UIF8 2168 aaKnown RBP22.32■■□□□ 1.16
CIRBP-217ENST00000588230 ABCB11O95342 1321 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 MYH6P13533 1939 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 ASB14A6NK59 587 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 CALML3P27482 149 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 EXOSC10Q01780 885 aaKnown RBP22.31■■□□□ 1.16
CIRBP-217ENST00000588230 LRRC41Q15345 812 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 CCDC144CPQ8IYA2 1237 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 KCNB2Q92953 911 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 AMNQ9BXJ7 453 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 SENP6Q9GZR1 1112 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-217ENST00000588230 KATNBL1Q9H079 304 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 PCDH10Q9P2E7 1040 aa22.31■■□□□ 1.16
CIRBP-217ENST00000588230 ADD3Q9UEY8 706 aaKnown RBP22.31■■□□□ 1.16
CIRBP-217ENST00000588230 ZHX1Q9UKY1 873 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-217ENST00000588230 ZMYND8Q9ULU4 1186 aaPredicted RBP22.31■■□□□ 1.16
CIRBP-217ENST00000588230 ZBTB5O15062 677 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 CALM1P0DP23 149 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 CALM2P0DP24 149 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 CALM3P0DP25 149 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 AKR1A1P14550 325 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 FXR1P51114 621 aaKnown RBP eCLIP22.3■■□□□ 1.16
CIRBP-217ENST00000588230 ACVR2BQ13705 512 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 SYNE3Q6ZMZ3 975 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 HOMER1Q86YM7 354 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 ARRDC4Q8NCT1 418 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 MTMR8Q96EF0 704 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 TCEANC2Q96MN5 208 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 ABHD16BQ9H3Z7 469 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 RIOX1Q9H6W3 641 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 MRPL11Q9Y3B7 192 aaKnown RBP22.3■■□□□ 1.16
CIRBP-217ENST00000588230 SNX14Q9Y5W7 946 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 LRRC37A2A6NM11 1700 aa22.3■■□□□ 1.16
CIRBP-217ENST00000588230 ADCY6O43306 1168 aa22.29■■□□□ 1.16
CIRBP-217ENST00000588230 EPB41L2O43491 1005 aaKnown RBP22.29■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms