RNA–Protein interactions for RNA: ENST00000587323.5

CIRBP-213, Transcript of cold inducible RNA binding protein, humanhuman

TSL 5 BASIC

Gene CIRBP, Length 1,092 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-213ENST00000587323 HOMER1Q86YM7 354 aa23.11■■□□□ 1.29
CIRBP-213ENST00000587323 DEFB118Q96PH6 123 aa23.11■■□□□ 1.29
CIRBP-213ENST00000587323 AMNQ9BXJ7 453 aa23.11■■□□□ 1.29
CIRBP-213ENST00000587323 MRPL11Q9Y3B7 192 aaKnown RBP23.11■■□□□ 1.29
CIRBP-213ENST00000587323 CYP46A1Q9Y6A2 500 aa23.11■■□□□ 1.29
CIRBP-213ENST00000587323 PTPDC1A2A3K4 754 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 ZBTB43O43298 467 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 SGPL1O95470 568 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 RPS6KB1P23443 525 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 MUM1L1Q5H9M0 696 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 PRPF38BQ5VTL8 546 aaKnown RBP23.1■■□□□ 1.29
CIRBP-213ENST00000587323 MICU3Q86XE3 530 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 CCDC144CPQ8IYA2 1237 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 MSL3Q8N5Y2 521 aaKnown RBP23.1■■□□□ 1.29
CIRBP-213ENST00000587323 FANCBQ8NB91 859 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 TINF2Q9BSI4 451 aa23.1■■□□□ 1.29
CIRBP-213ENST00000587323 A1CFQ9NQ94 594 aaKnown RBP23.1■■□□□ 1.29
CIRBP-213ENST00000587323 ZBTB5O15062 677 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 CPA1P15085 419 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 EN2P19622 333 aaPredicted RBP23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RXRAP19793 462 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 SMARCA1P28370 1054 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 GJA8P48165 433 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RNF207Q6ZRF8 634 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RUFY3Q7L099 469 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 MCF2L2Q86YR7 1114 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RRP36Q96EU6 259 aaKnown RBP23.09■■□□□ 1.29
CIRBP-213ENST00000587323 MPHOSPH6Q99547 160 aaKnown RBP23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RIOX1Q9H6W3 641 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 RBM28Q9NW13 759 aaKnown RBP23.09■■□□□ 1.29
CIRBP-213ENST00000587323 SEC63Q9UGP8 760 aaKnown RBP23.09■■□□□ 1.29
CIRBP-213ENST00000587323 CNPY2Q9Y2B0 182 aa23.09■■□□□ 1.29
CIRBP-213ENST00000587323 DNAJC25-GNG10A0A024R161 153 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 KLF18A0A0U1RQI7 1052 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 MAP3K21Q5TCX8 1036 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 ZNF467Q7Z7K2 595 aaPredicted RBP23.08■■□□□ 1.29
CIRBP-213ENST00000587323 RAB11FIP4Q86YS3 637 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 U2AF1L4Q8WU68 220 aaKnown RBP23.08■■□□□ 1.29
CIRBP-213ENST00000587323 TM6SF1Q9BZW5 370 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 CYP39A1Q9NYL5 469 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 PCDH10Q9P2E7 1040 aa23.08■■□□□ 1.29
CIRBP-213ENST00000587323 ADD3Q9UEY8 706 aaKnown RBP23.08■■□□□ 1.29
CIRBP-213ENST00000587323 PNMA6FA0A0J9YX94 578 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 B4DLN1 442 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 MSCO60682 206 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 CALML3P27482 149 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 CCND3P30281 292 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-213ENST00000587323 MRPL12P52815 198 aaKnown RBP23.07■■□□□ 1.28
CIRBP-213ENST00000587323 BAATQ14032 418 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-213ENST00000587323 COL9A3Q14050 684 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-213ENST00000587323 APOA5Q6Q788 366 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 PIBF1Q8WXW3 757 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 BRF1Q92994 677 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 PIGSQ96S52 555 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 ZSWIM6Q9HCJ5 1215 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 PAK6Q9NQU5 681 aaPredicted RBP23.07■■□□□ 1.28
CIRBP-213ENST00000587323 PCDHA1Q9Y5I3 950 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 GTF3C3Q9Y5Q9 886 aa23.07■■□□□ 1.28
CIRBP-213ENST00000587323 SMCHD1A6NHR9 2005 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 ASB14A6NK59 587 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 NFIBO00712 420 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 TAL1P17542 331 aaPredicted RBP23.06■■□□□ 1.28
CIRBP-213ENST00000587323 ANAPC15P60006 121 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 RTN1Q16799 776 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 SPZ1Q9BXG8 430 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 MAF1Q9H063 256 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 NRBP1Q9UHY1 535 aa23.06■■□□□ 1.28
CIRBP-213ENST00000587323 RBBP6Q7Z6E9 1792 aaKnown RBP23.06■■□□□ 1.28
CIRBP-213ENST00000587323 CCDC196A0A1B0GTZ2 297 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 GOLGA8AA7E2F4 631 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 GOLGA8BA8MQT2 603 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 CNTN2Q02246 1040 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 APOBRQ0VD83 1088 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 PPP2R5BQ15173 497 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 PRAMEF19Q5SWL8 479 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 FAM133AQ8N9E0 248 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 RGS22Q8NE09 1264 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 CLEC4DQ8WXI8 215 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 MTMR8Q96EF0 704 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 SYNGAP1Q96PV0 1343 aa23.05■■□□□ 1.28
CIRBP-213ENST00000587323 MAMDC4Q6UXC1 1216 aa23.04■■□□□ 1.28
CIRBP-213ENST00000587323 CCDC82Q8N4S0 544 aa23.04■■□□□ 1.28
CIRBP-213ENST00000587323 PDRG1Q9NUG6 133 aa23.04■■□□□ 1.28
CIRBP-213ENST00000587323 DDX20Q9UHI6 824 aaKnown RBP23.04■■□□□ 1.28
CIRBP-213ENST00000587323 BRPF3Q9ULD4 1205 aa23.04■■□□□ 1.28
CIRBP-213ENST00000587323 BAZ2BQ9UIF8 2168 aaKnown RBP23.04■■□□□ 1.28
CIRBP-213ENST00000587323 KIAA0100Q14667 2235 aaKnown RBP23.04■■□□□ 1.28
CIRBP-213ENST00000587323 CYTH3O43739 400 aa23.03■■□□□ 1.28
CIRBP-213ENST00000587323 METAP2P50579 478 aaKnown RBP eCLIP23.03■■□□□ 1.28
CIRBP-213ENST00000587323 RCAN1P53805 252 aa23.03■■□□□ 1.28
CIRBP-213ENST00000587323 RPS6P62753 249 aaKnown RBP23.03■■□□□ 1.28
CIRBP-213ENST00000587323 FBXL16Q8N461 479 aa23.03■■□□□ 1.28
CIRBP-213ENST00000587323 SRBD1Q8N5C6 995 aaKnown RBP23.03■■□□□ 1.28
CIRBP-213ENST00000587323 SEPT4O43236 478 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 PLEKHA8P1O95397 391 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 CFBP00751 764 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 CYBAP13498 195 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 TMTC3Q6ZXV5 915 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 ARMCX2Q7L311 632 aa23.02■■□□□ 1.28
CIRBP-213ENST00000587323 CMTR1Q8N1G2 835 aaKnown RBP23.02■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms