RNA–Protein interactions for RNA: ENST00000586538.1

ACTN4-209, Transcript of actinin alpha 4, humanhuman

TSL 5

Gene ACTN4, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-209ENST00000586538 CCDC144BQ3MJ40 725 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 NSMFQ6X4W1 530 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 NOL8Q76FK4 1167 aaKnown RBP13.19□□□□□ -0.3
ACTN4-209ENST00000586538 TBC1D10CQ8IV04 446 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 UBAC1Q9BSL1 405 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 UPF3AQ9H1J1 476 aaKnown RBP13.19□□□□□ -0.3
ACTN4-209ENST00000586538 VTA1Q9NP79 307 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 INCENPQ9NQS7 918 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 PDLIM7Q9NR12 457 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 CYP39A1Q9NYL5 469 aa13.19□□□□□ -0.3
ACTN4-209ENST00000586538 SMCHD1A6NHR9 2005 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 A0A0U1RQG5 324 aaPredicted RBP13.18□□□□□ -0.3
ACTN4-209ENST00000586538 PTPDC1A2A3K4 754 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 TLR3O15455 904 aaKnown RBP13.18□□□□□ -0.3
ACTN4-209ENST00000586538 SNHG28P0DPA3 235 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 TNFAIP2Q03169 654 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 ASPRV1Q53RT3 343 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 TTC22Q5TAA0 569 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 ANKRD33Q7Z3H0 272 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 PNMA1Q8ND90 353 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 KLHDC9Q8NEP7 349 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 AP5M1Q9H0R1 490 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 Q9Y3F1 56 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 LTBP2Q14767 1821 aa13.18□□□□□ -0.3
ACTN4-209ENST00000586538 NEDD4P46934 1319 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 FRMPD2Q68DX3 1309 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-209ENST00000586538 PQBP1O60828 265 aaKnown RBP13.17□□□□□ -0.3
ACTN4-209ENST00000586538 KDM4AO75164 1064 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 ASGR1P07306 291 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 RAG1P15918 1043 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 NKX3-2P78367 333 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 CNTN2Q02246 1040 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 TLE2Q04725 743 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 TRAF1Q13077 416 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 KCNA10Q16322 511 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 BRDTQ58F21 947 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-209ENST00000586538 GNASQ5JWF2 1037 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 IQSEC1Q6DN90 963 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 TLK2Q86UE8 772 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 DNERQ8NFT8 737 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 CHMP4CQ96CF2 233 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 FGD4Q96M96 766 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 ZSCAN10Q96SZ4 725 aaPredicted RBP13.17□□□□□ -0.3
ACTN4-209ENST00000586538 GPCPD1Q9NPB8 672 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 TMEM39AQ9NV64 488 aa13.17□□□□□ -0.3
ACTN4-209ENST00000586538 ERICH2A1L162 156 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 SOX1O00570 391 aaPredicted RBP13.16□□□□□ -0.3
ACTN4-209ENST00000586538 SLC16A2P36021 539 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 SART3Q15020 963 aaKnown RBP13.16□□□□□ -0.3
ACTN4-209ENST00000586538 MUM1L1Q5H9M0 696 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 RNF207Q6ZRF8 634 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 MCF2L2Q86YR7 1114 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 ANKS1AQ92625 1134 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 LRCH3Q96II8 777 aa13.16□□□□□ -0.3
ACTN4-209ENST00000586538 U3KPZ7 1027 aaPredicted RBP13.16□□□□□ -0.3
ACTN4-209ENST00000586538 TNKSO95271 1327 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 ABCB11O95342 1321 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 LAMA3Q16787 3333 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 MCM3APO60318 1980 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 SOWAHBA6NEL2 793 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 B4E1Z4 1266 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 KIAA0355O15063 1070 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 NKRFO15226 690 aaKnown RBP eCLIP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 DHX16O60231 1041 aaKnown RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 PARP1P09874 1014 aaKnown RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 ALDH5A1P51649 535 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 FAM109BQ6ICB4 259 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 CCSAPQ6IQ19 270 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 TTBK2Q6IQ55 1244 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 DEFB123Q8N688 67 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 RGS22Q8NE09 1264 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 MORC4Q8TE76 937 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 BADQ92934 168 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 LENG1Q96BZ8 264 aaPredicted RBP13.15□□□□□ -0.3
ACTN4-209ENST00000586538 KATNBL1Q9H079 304 aa13.15□□□□□ -0.3
ACTN4-209ENST00000586538 LRRC37A2A6NM11 1700 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 ARVCFO00192 962 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 CALML3P27482 149 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 CPT1AP50416 773 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 SNAP25P60880 206 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 FPGSQ05932 587 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 PDE4DQ08499 809 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 BAATQ14032 418 aaPredicted RBP13.14□□□□□ -0.31
ACTN4-209ENST00000586538 FSCN1Q16658 493 aaKnown RBP13.14□□□□□ -0.31
ACTN4-209ENST00000586538 ZNF697Q5TEC3 545 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 KIAA1211Q6ZU35 1233 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 RASGRP2Q7LDG7 609 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 RALYLQ86SE5 291 aaKnown RBP13.14□□□□□ -0.31
ACTN4-209ENST00000586538 ZKSCAN3Q9BRR0 538 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 GNEQ9Y223 722 aaKnown RBP13.14□□□□□ -0.31
ACTN4-209ENST00000586538 DNAH12Q6ZR08 3092 aa13.14□□□□□ -0.31
ACTN4-209ENST00000586538 TRIM43BA6NCK2 446 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 NFIBO00712 420 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 PPIGQ13427 754 aaKnown RBP eCLIP13.13□□□□□ -0.311e-14■■□□□ 11.6
ACTN4-209ENST00000586538 CDC37Q16543 378 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 DUSP28Q4G0W2 176 aa13.13□□□□□ -0.31
ACTN4-209ENST00000586538 FBXO16Q8IX29 292 aaPredicted RBP13.13□□□□□ -0.31
ACTN4-209ENST00000586538 TMEM199Q8N511 208 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms