RNA–Protein interactions for RNA: ENST00000585752.5

ATG4D-203, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 5

Gene ATG4D, Length 729 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-203ENST00000585752 RASGRP2Q7LDG7 609 aa21.9■■□□□ 1.1
ATG4D-203ENST00000585752 MPHOSPH6Q99547 160 aaKnown RBP21.9■■□□□ 1.1
ATG4D-203ENST00000585752 TSEN34Q9BSV6 310 aaKnown RBP21.9■■□□□ 1.1
ATG4D-203ENST00000585752 RANBP17Q9H2T7 1088 aaKnown RBP21.9■■□□□ 1.1
ATG4D-203ENST00000585752 PHF24Q9UPV7 400 aa21.9■■□□□ 1.1
ATG4D-203ENST00000585752 C6orf222P0C671 652 aaPredicted RBP21.89■■□□□ 1.09
ATG4D-203ENST00000585752 TRDNQ13061 729 aa21.89■■□□□ 1.09
ATG4D-203ENST00000585752 TRIM60Q495X7 471 aa21.89■■□□□ 1.09
ATG4D-203ENST00000585752 FAM133AQ8N9E0 248 aa21.89■■□□□ 1.09
ATG4D-203ENST00000585752 PCSK9Q8NBP7 692 aaKnown RBP21.89■■□□□ 1.09
ATG4D-203ENST00000585752 UBAC1Q9BSL1 405 aa21.89■■□□□ 1.09
ATG4D-203ENST00000585752 STARD7Q9NQZ5 370 aa21.89■■□□□ 1.09
ATG4D-203ENST00000585752 ADD3Q9UEY8 706 aaKnown RBP21.89■■□□□ 1.09
ATG4D-203ENST00000585752 SYNRGQ9UMZ2 1314 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 PTPDC1A2A3K4 754 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 MOXD2PA6NHM9 499 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 B4E1Z4 1266 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 PTH1RQ03431 593 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 MUM1L1Q5H9M0 696 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 LENG1Q96BZ8 264 aaPredicted RBP21.88■■□□□ 1.09
ATG4D-203ENST00000585752 GLT1D1Q96MS3 346 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 CYP39A1Q9NYL5 469 aa21.88■■□□□ 1.09
ATG4D-203ENST00000585752 A0A1W2PQ45 241 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-203ENST00000585752 A0A1W2PQY0 241 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 DHX16O60231 1041 aaKnown RBP21.87■■□□□ 1.09
ATG4D-203ENST00000585752 ACLYP53396 1101 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 ZNF543Q08ER8 600 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 C1orf53Q5VUE5 145 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 PNMA1Q8ND90 353 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 ZSCAN10Q96SZ4 725 aaPredicted RBP21.87■■□□□ 1.09
ATG4D-203ENST00000585752 DNAH12Q6ZR08 3092 aa21.87■■□□□ 1.09
ATG4D-203ENST00000585752 B4DLN1 442 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 ADAMTS4O75173 837 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 MRPL12P52815 198 aaKnown RBP21.86■■□□□ 1.09
ATG4D-203ENST00000585752 TNFAIP2Q03169 654 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 KCNA10Q16322 511 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 GNASQ5JWF2 1037 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 AP5M1Q9H0R1 490 aa21.86■■□□□ 1.09
ATG4D-203ENST00000585752 RBM8AQ9Y5S9 174 aaKnown RBP21.86■■□□□ 1.09
ATG4D-203ENST00000585752 SOWAHBA6NEL2 793 aa21.85■■□□□ 1.09
ATG4D-203ENST00000585752 PQBP1O60828 265 aaKnown RBP21.85■■□□□ 1.09
ATG4D-203ENST00000585752 GOLGA8HP0CJ92 632 aa21.85■■□□□ 1.09
ATG4D-203ENST00000585752 SNX17Q15036 470 aa21.85■■□□□ 1.09
ATG4D-203ENST00000585752 RNF207Q6ZRF8 634 aa21.85■■□□□ 1.09
ATG4D-203ENST00000585752 MAP4K1Q92918 833 aa21.85■■□□□ 1.09
ATG4D-203ENST00000585752 TNKSO95271 1327 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 DCDC2CA8MYV0 355 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 ZEB2O60315 1214 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 CLTBP09497 229 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 TLE2Q04725 743 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 BAATQ14032 418 aaPredicted RBP21.84■■□□□ 1.09
ATG4D-203ENST00000585752 ASPRV1Q53RT3 343 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 IFIT1BQ5T764 474 aaKnown RBP21.84■■□□□ 1.09
ATG4D-203ENST00000585752 EEPD1Q7L9B9 569 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 FGD4Q96M96 766 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 ZSWIM5Q9P217 1185 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 GTF3C3Q9Y5Q9 886 aa21.84■■□□□ 1.09
ATG4D-203ENST00000585752 MROH7Q68CQ1 1323 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 ERICH2A1L162 156 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 REC8O95072 547 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 PARP1P09874 1014 aaKnown RBP21.83■■□□□ 1.09
ATG4D-203ENST00000585752 CALML3P27482 149 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 GJA9P57773 515 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 LRIT3Q3SXY7 679 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 USH1GQ495M9 461 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 RNF20Q5VTR2 975 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 IQSEC1Q6DN90 963 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 RALYLQ86SE5 291 aaKnown RBP21.83■■□□□ 1.09
ATG4D-203ENST00000585752 KLHDC9Q8NEP7 349 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 UBA5Q9GZZ9 404 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 LSG1Q9H089 658 aaKnown RBP21.83■■□□□ 1.09
ATG4D-203ENST00000585752 TMEM39AQ9NV64 488 aa21.83■■□□□ 1.09
ATG4D-203ENST00000585752 LTBP2Q14767 1821 aa21.83■■□□□ 1.08
ATG4D-203ENST00000585752 ASGR1P07306 291 aa21.82■■□□□ 1.08
ATG4D-203ENST00000585752 SNHG28P0DPA3 235 aa21.82■■□□□ 1.08
ATG4D-203ENST00000585752 RAG1P15918 1043 aa21.82■■□□□ 1.08
ATG4D-203ENST00000585752 CST5P28325 142 aaPredicted RBP21.82■■□□□ 1.08
ATG4D-203ENST00000585752 LRCH3Q96II8 777 aa21.82■■□□□ 1.08
ATG4D-203ENST00000585752 VTA1Q9NP79 307 aa21.82■■□□□ 1.08
ATG4D-203ENST00000585752 WDR19Q8NEZ3 1342 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 LOC102724159A0A0B4J2E5 919 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 NFIBO00712 420 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 ALDH5A1P51649 535 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-203ENST00000585752 SART3Q15020 963 aaKnown RBP21.81■■□□□ 1.08
ATG4D-203ENST00000585752 PWP2Q15269 919 aaKnown RBP21.81■■□□□ 1.08
ATG4D-203ENST00000585752 TLK2Q86UE8 772 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 FBXO16Q8IX29 292 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-203ENST00000585752 ENAHQ8N8S7 591 aaPredicted RBP21.81■■□□□ 1.08
ATG4D-203ENST00000585752 ANKS1AQ92625 1134 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 BADQ92934 168 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 PDLIM7Q9NR12 457 aa21.81■■□□□ 1.08
ATG4D-203ENST00000585752 ELP1O95163 1332 aa21.8■■□□□ 1.08
ATG4D-203ENST00000585752 LCTP09848 1927 aa21.8■■□□□ 1.08
ATG4D-203ENST00000585752 SOX1O00570 391 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-203ENST00000585752 TLR3O15455 904 aaKnown RBP21.8■■□□□ 1.08
ATG4D-203ENST00000585752 DYNC1LI2O43237 492 aaPredicted RBP21.8■■□□□ 1.08
ATG4D-203ENST00000585752 EIF5BO60841 1220 aaKnown RBP21.8■■□□□ 1.08
ATG4D-203ENST00000585752 CYP21A2P08686 494 aa21.8■■□□□ 1.08
ATG4D-203ENST00000585752 PDE4DQ08499 809 aa21.8■■□□□ 1.08
ATG4D-203ENST00000585752 TOX2Q96NM4 488 aa21.8■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms