RNA–Protein interactions for RNA: ENST00000584966.1

CDH8-213, Transcript of cadherin 8, humanhuman

TSL 2

Gene CDH8, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-213ENST00000584966 DLK2Q6UY11 383 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 SYT9Q86SS6 491 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 PNMA8AQ86V59 439 aaPredicted RBP6.83□□□□□ -1.32
CDH8-213ENST00000584966 SIX5Q8N196 739 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 ZGPATQ8N5A5 531 aaKnown RBP6.83□□□□□ -1.32
CDH8-213ENST00000584966 CCDC136Q96JN2 1154 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 PAG1Q9NWQ8 432 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 ABCF2Q9UG63 623 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 KIAA1024Q9UPX6 916 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 DAGLAQ9Y4D2 1042 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 ATAD5Q96QE3 1844 aa6.83□□□□□ -1.32
CDH8-213ENST00000584966 OTOFQ9HC10 1997 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 C9orf172C9J069 976 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 TOMM70O94826 608 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 GSPT1P15170 499 aaKnown RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 TXKP42681 527 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 RBM25P49756 843 aaKnown RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 RHBDL3P58872 404 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 FMR1Q06787 632 aaKnown RBP eCLIP6.82□□□□□ -1.32
CDH8-213ENST00000584966 ADGRE1Q14246 886 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 MBTPS1Q14703 1052 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 SPTY2D1Q68D10 685 aaPredicted RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 LDHDQ86WU2 507 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 KBTBD3Q8NAB2 608 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 TP53INP1Q96A56 240 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 DNAJC2Q99543 621 aaKnown RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 TDRD3Q9H7E2 651 aaKnown RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 HDAC9Q9UKV0 1011 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 SCAF8Q9UPN6 1271 aaKnown RBP6.82□□□□□ -1.32
CDH8-213ENST00000584966 PHIPQ8WWQ0 1821 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 LAMB1P07942 1786 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 CNTNAP1P78357 1384 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 RFX7Q2KHR2 1363 aa6.82□□□□□ -1.32
CDH8-213ENST00000584966 MROH7-TTC4A0A0A0MT08 1334 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 MAST3O60307 1309 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 PASKQ96RG2 1323 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 PITPNM2Q9BZ72 1349 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ERC2O15083 957 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ALBP02768 609 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 FAM157BP0CG42 384 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ELNP15502 786 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 PDE6AP16499 860 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ADD2P35612 726 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 TTF1Q15361 905 aaPredicted RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 DLGAP5Q15398 846 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 EAPPQ56P03 285 aaPredicted RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 TTC22Q5TAA0 569 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ANGEL2Q5VTE6 544 aaKnown RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 MAP1SQ66K74 1059 aaPredicted RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 CDC42EP5Q6NZY7 148 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 CNTROBQ8N137 903 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 MAGEB6Q8N7X4 407 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 TEKT1Q969V4 418 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 RIOK1Q9BRS2 568 aaKnown RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 GLIS2Q9BZE0 524 aaPredicted RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 RAI14Q9P0K7 980 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 LRP2BPQ9P2M1 347 aa6.81□□□□□ -1.32
CDH8-213ENST00000584966 ZNF70Q9UC06 446 aaPredicted RBP6.81□□□□□ -1.32
CDH8-213ENST00000584966 ZNF532Q9HCE3 1301 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 CLRN2A0PK11 232 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 SSC5DA1L4H1 1573 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 ADM5C9JUS6 153 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 WDHD1O75717 1129 aaPredicted RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 IDH1O75874 414 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 LDHCP07864 332 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 NID1P14543 1247 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 SELPP16109 830 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 BTDP43251 543 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 RBM5P52756 815 aaKnown RBP eCLIP6.8□□□□□ -1.32
CDH8-213ENST00000584966 CACNB3P54284 484 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 DYNLL1P63167 89 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 MAP3K12Q12852 859 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 NFIAQ12857 509 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 UBE3CQ15386 1083 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 OXLD1Q5BKU9 147 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 SLC9C2Q5TAH2 1124 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 FKBP1CQ5VVH2 108 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 NAA16Q6N069 864 aaPredicted RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 TMED8Q6PL24 325 aaPredicted RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 USP48Q86UV5 1035 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 DZIP1Q86YF9 867 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 ZFPM1Q8IX07 1006 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 MICALL1Q8N3F8 863 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 SH3RF3Q8TEJ3 882 aaPredicted RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 EVI5LQ96CN4 794 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 GPATCH3Q96I76 525 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 TEPSINQ96N21 525 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 MDFIQ99750 246 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 IDI2Q9BXS1 227 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 NIFKQ9BYG3 293 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 PUS7LQ9H0K6 701 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 DDX4Q9NQI0 724 aaKnown RBP6.8□□□□□ -1.32
CDH8-213ENST00000584966 USP40Q9NVE5 1235 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 GGA3Q9NZ52 723 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 STARD13Q9Y3M8 1113 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 LAMA4Q16363 1823 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 PTPRFP10586 1907 aa6.8□□□□□ -1.32
CDH8-213ENST00000584966 SOWAHDA6NJG2 315 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 TRAF5O00463 557 aa6.79□□□□□ -1.32
CDH8-213ENST00000584966 RNF113AO15541 343 aaKnown RBP6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms