RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 CYP2C18P33260 490 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 RASIP1Q5U651 963 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ACAD9Q9H845 621 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 MSRAQ9UJ68 235 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SYNPO2Q9UMS6 1093 aa15.5■□□□□ 0.07
CDK5RAP3-234ENST00000584525 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TNFRSF10AO00220 468 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CTAGE5O15320 804 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FDX1P10109 184 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PDE4AP27815 886 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 STAT2P52630 851 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PDE4BQ07343 736 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 NMIQ13287 307 aaPredicted RBP15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 MCMDC2Q4G0Z9 681 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TTC22Q5TAA0 569 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CXCL17Q6UXB2 119 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 IFNL3Q8IZI9 196 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CHURC1Q8WUH1 139 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 AGBL1Q96MI9 1066 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 KATNBL1Q9H079 304 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 AP5M1Q9H0R1 490 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 MTIF3Q9H2K0 278 aaKnown RBP15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 IL23AQ9NPF7 189 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 RNF146Q9NTX7 359 aa15.49■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SOWAHBA6NEL2 793 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ASB14A6NK59 587 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 DYNC1LI2O43237 492 aaPredicted RBP15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CABYRO75952 493 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CD4P01730 458 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FGBP02675 491 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SDSP20132 328 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 IGFBP4P22692 258 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SLC1A4P43007 532 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TFAP4Q01664 338 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 RAB30Q15771 203 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FSCN1Q16658 493 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 AKNAD1Q5T1N1 836 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CWC27Q6UX04 472 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TLK2Q86UE8 772 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FAM160B2Q86V87 743 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FAM133AQ8N9E0 248 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 NEDD1Q8NHV4 660 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 STAG1Q8WVM7 1258 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 HERVK_113Q902F9 699 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 HIPK3Q9H422 1215 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 A1CFQ9NQ94 594 aaKnown RBP15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TTC28Q96AY4 2481 aa15.48■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ZEB2O60315 1214 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ALAS1P13196 640 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 MCCP23508 829 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 NKX3-2P78367 333 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ITGA7Q13683 1181 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CCDC85BQ15834 202 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 OTOP2Q7RTS6 562 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ATXN2LQ8WWM7 1075 aaKnown RBP15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 RUFY2Q8WXA3 655 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 FAM227BQ96M60 508 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TRERF1Q96PN7 1200 aa15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CXXC1Q9P0U4 656 aaPredicted RBP15.47■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ASTN1O14525 1302 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CCDC171Q6TFL3 1326 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 A0A0D9SFI3 127 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SMPD1P17405 629 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 PTGS1P23219 599 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 CCL23P55773 120 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SNAP25P60880 206 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ADGRE1Q14246 886 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TKFCQ3LXA3 575 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ERICH6BQ5W0A0 696 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 EEPD1Q7L9B9 569 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SLC43A3Q8NBI5 491 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 GMCL1Q96IK5 515 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 TRPV6Q9H1D0 765 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 NKX2-4Q9H2Z4 354 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SLC28A3Q9HAS3 691 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 GNEQ9Y223 722 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 DDX49Q9Y6V7 483 aaKnown RBP15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 SMCHD1A6NHR9 2005 aa15.46■□□□□ 0.07
CDK5RAP3-234ENST00000584525 ZNF536O15090 1300 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 UMODL1Q5DID0 1318 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PPARAQ07869 468 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 IQSEC1Q6DN90 963 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 KCTD1Q719H9 257 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 ASB2Q96Q27 587 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PDGFCQ9NRA1 345 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 TOMM22Q9NS69 142 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 THEGQ9P2T0 379 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 STX8Q9UNK0 236 aa15.45■□□□□ 0.06
CDK5RAP3-234ENST00000584525 GRIN2DO15399 1336 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PSMC6P62333 389 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MRPS5P82675 430 aaKnown RBP15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PPP4R3BQ5MIZ7 849 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CASC1Q6TDU7 716 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 FBXO16Q8IX29 292 aaPredicted RBP15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 IL27Q8NEV9 243 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 SEZ6LQ9BYH1 1024 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 PPP4R2Q9NY27 417 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 CYP39A1Q9NYL5 469 aa15.44■□□□□ 0.06
CDK5RAP3-234ENST00000584525 MTMR7Q9Y216 660 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms