RNA–Protein interactions for RNA: ENST00000584424.1

TTC39C-210, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2

Gene TTC39C, Length 739 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-210ENST00000584424 PWP1Q13610 501 aa6.26□□□□□ -1.41
TTC39C-210ENST00000584424 HLA-DQA1Q5Y7H0 255 aa6.26□□□□□ -1.41
TTC39C-210ENST00000584424 RSRP1Q9BUV0 290 aa6.26□□□□□ -1.41
TTC39C-210ENST00000584424 DSCC1Q9BVC3 393 aa6.26□□□□□ -1.41
TTC39C-210ENST00000584424 SUPT5HO00267 1087 aaKnown RBP6.25□□□□□ -1.41
TTC39C-210ENST00000584424 ITGB3P05106 788 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 FBLN1P23142 703 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 TACR1P25103 407 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 RTP2Q5QGT7 225 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 CDCP2Q5VXM1 449 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 NLRC3Q7RTR2 1065 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 TMEM192Q8IY95 271 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 ATG4CQ96DT6 458 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 CNNM2Q9H8M5 875 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 SCRIBQ14160 1630 aa6.25□□□□□ -1.41
TTC39C-210ENST00000584424 SH3D21A4FU49 640 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 NOBOXO60393 691 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 NCAM1P13591 858 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 GARTP22102 1010 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 HTRA3P83110 453 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 AUHQ13825 339 aaKnown RBP6.24□□□□□ -1.41
TTC39C-210ENST00000584424 USP48Q86UV5 1035 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 CARFQ8N187 725 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 LOXL4Q96JB6 756 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 SLC6A18Q96N87 628 aa6.24□□□□□ -1.41
TTC39C-210ENST00000584424 SRGAP3O43295 1099 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 GSNP06396 782 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 KCNA1Q09470 495 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 CPZQ66K79 652 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 CWF19L1Q69YN2 538 aaKnown RBP6.23□□□□□ -1.41
TTC39C-210ENST00000584424 FBXL19Q6PCT2 694 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 ALG3Q92685 438 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 C8orf49Q96NF6 230 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 LNPKQ9C0E8 428 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 BCAS3Q9H6U6 928 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 RXFP1Q9HBX9 757 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 PDLIM7Q9NR12 457 aa6.23□□□□□ -1.41
TTC39C-210ENST00000584424 SYNJ2O15056 1496 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 FAM86C2PA6NEL3 165 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 ATE1O95260 518 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 ASGR2P07307 311 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 DLX2Q07687 328 aaPredicted RBP6.22□□□□□ -1.41
TTC39C-210ENST00000584424 GK5Q6ZS86 529 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 TMC4Q7Z404 712 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 SLC12A9Q9BXP2 914 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 RNF38Q9H0F5 515 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 KBTBD4Q9NVX7 518 aa6.22□□□□□ -1.41
TTC39C-210ENST00000584424 OVOL3O00110 214 aa6.21□□□□□ -1.42
TTC39C-210ENST00000584424 CCNFP41002 786 aa6.21□□□□□ -1.42
TTC39C-210ENST00000584424 VTI1BQ9UEU0 232 aa6.21□□□□□ -1.42
TTC39C-210ENST00000584424 SUPT16HQ9Y5B9 1047 aaKnown RBP6.21□□□□□ -1.42
TTC39C-210ENST00000584424 ZNF20P17024 532 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 MCM4P33991 863 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 SARSP49591 514 aaKnown RBP6.2□□□□□ -1.42
TTC39C-210ENST00000584424 HMGA2P52926 109 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 CLCQ05315 142 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 SEZ6Q53EL9 994 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 NOX5Q96PH1 765 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 SORCS2Q96PQ0 1159 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 RBM15Q96T37 977 aaKnown RBP eCLIP6.2□□□□□ -1.42
TTC39C-210ENST00000584424 SCAND2PQ9GZW5 306 aaPredicted RBP6.2□□□□□ -1.42
TTC39C-210ENST00000584424 MRS2Q9HD23 443 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 COPRSQ9NQ92 184 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 MYO15BQ96JP2 1530 aa6.2□□□□□ -1.42
TTC39C-210ENST00000584424 ROBO2Q9HCK4 1378 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 H0Y8X5 98 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 SORBS3O60504 671 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 NME1P15531 152 aaKnown RBP6.19□□□□□ -1.42
TTC39C-210ENST00000584424 EIF4A3P38919 411 aaKnown RBP6.19□□□□□ -1.42
TTC39C-210ENST00000584424 CRKP46108 304 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 B3GNT8Q7Z7M8 397 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 CCDC144CPQ8IYA2 1237 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 C7orf61Q8IZ16 206 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 CHST13Q8NET6 341 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 EHMT1Q9H9B1 1298 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 NTMQ9P121 344 aa6.19□□□□□ -1.42
TTC39C-210ENST00000584424 C6P13671 934 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 PMLP29590 882 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 NOL9Q5SY16 702 aaKnown RBP6.18□□□□□ -1.42
TTC39C-210ENST00000584424 CYP2R1Q6VVX0 501 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 ZNF761Q86XN6 746 aaPredicted RBP6.18□□□□□ -1.42
TTC39C-210ENST00000584424 RGS22Q8NE09 1264 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 SMARCC2Q8TAQ2 1214 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 BRF1Q92994 677 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 ZBTB8AQ96BR9 441 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 LRRC3Q9BY71 257 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 KRTAP3-1Q9BYR8 98 aa6.18□□□□□ -1.42
TTC39C-210ENST00000584424 WDR62O43379 1518 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 C9IYK1 514 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 FGF10O15520 208 aaPredicted RBP6.17□□□□□ -1.42
TTC39C-210ENST00000584424 GDF5P43026 501 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 SMAD4Q13485 552 aaKnown RBP6.17□□□□□ -1.42
TTC39C-210ENST00000584424 TDRD10Q5VZ19 366 aaKnown RBP6.17□□□□□ -1.42
TTC39C-210ENST00000584424 TTLL7Q6ZT98 887 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 SAMD11Q96NU1 681 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 SLC9A7Q96T83 725 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 SPATA6Q9NWH7 488 aaPredicted RBP6.17□□□□□ -1.42
TTC39C-210ENST00000584424 PRR13Q9NZ81 148 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 LAMC3Q9Y6N6 1575 aa6.17□□□□□ -1.42
TTC39C-210ENST00000584424 MRC2Q9UBG0 1479 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms